Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0896 ATGAATAAATTATTTCGTTTCTTGGTGAATAAAGAGATAAATAATGTGACCCCACAAACCCTCCACCACTCTATCATAATAAATTCTGCCACAACCGCTCTAATTTGCATCCATTCTTGCATCACATTGAATTCATTTCCTAATTCTCAGAATATGATGATGGCCTTCTCTAATAACAATGACCAAGAACTTGGACTTGGTCTTGGTCTTGGTCTTGTTCATGGTGAAAACTGCAGGCAGAAGAAGGAGAAAGAGGAAGAGGATCCATGCAGCAATATTAAGGCATACCCATCTCTTACTTTAGGACCAGAACAGGATTCTAGATCTTCTCAAAGCGCAGTTGTTTCTTCATTTTCCAACTCATCGTCTAGCATCAAGAGGGAGAGAGATCAAGAATTCTTTCTGGACTTATACGAAGAAGAAAACAAGAAGAATAATAATAAGAATGGTAACCCCAGAAAGAAACTTAGGCTCACCAAACAACAGTCTGCACTCTTAGAGGATAGCTTCATACACCACTCTACTCTCAATCCGCAAAAGCAAGAGTTGGCAAAGAAGCTCAATCTGAGAGCGAGGCAAGTGGAGGTGTGGTTTCAGAACAGGAGAGCAAGGACAAAATTGAAGCAAACCGAAGCGGAGTGTGAGATATTGAAGAAGTGGTGTGAGAGGCTAAAAGAAGAGAACAAGAGGTTGCAAAAGGAGCTGCAACATCTAAAATCCATGAAAACAAACAACAAATAA 741 0.3995 MNKLFRFLVNKEINNVTPQTLHHSIIINSATTALICIHSCITLNSFPNSQNMMMAFSNNNDQELGLGLGLGLVHGENCRQKKEKEEEDPCSNIKAYPSLTLGPEQDSRSSQSAVVSSFSNSSSSIKRERDQEFFLDLYEEENKKNNNKNGNPRKKLRLTKQQSALLEDSFIHHSTLNPQKQELAKKLNLRARQVEVWFQNRRARTKLKQTEAECEILKKWCERLKEENKRLQKELQHLKSMKTNNK* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0896 246 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 49 105 - -
Ahy8g0896 246 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 109 243 - -
Ahy8g0896 246 SMART HOX_1 151 212 IPR001356 GO:0003677
Ahy8g0896 246 SUPERFAMILY Homeodomain-like 150 216 IPR009057 -
Ahy8g0896 246 PANTHER - 49 105 - -
Ahy8g0896 246 PANTHER - 109 243 - -
Ahy8g0896 246 ProSiteProfiles 'Homeobox' domain profile. 149 208 IPR001356 GO:0003677
Ahy8g0896 246 Gene3D - 150 214 - -
Ahy8g0896 246 Coils Coil 207 244 - -
Ahy8g0896 246 CDD homeodomain 152 209 IPR001356 GO:0003677
Ahy8g0896 246 SMART halz 208 246 IPR003106 GO:0006355|GO:0043565
Ahy8g0896 246 MobiDBLite consensus disorder prediction 102 121 - -
Ahy8g0896 246 MobiDBLite consensus disorder prediction 96 121 - -
Ahy8g0896 246 ProSitePatterns 'Homeobox' domain signature. 183 206 IPR017970 GO:0000981|GO:0006355
Ahy8g0896 246 Pfam Homeobox associated leucine zipper 208 242 IPR003106 GO:0006355|GO:0043565
Ahy8g0896 246 Pfam Homeodomain 153 206 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0896 Ahy-Chr8 17329479 17330985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0896 54 242 Homeobox Transcription Factor Family AT2G22800 47.596 2.18e-43 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Ahy8g0896 Homeodomain 1.40E-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0896 K09338 - gmx:100790927 177.948