Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0867 ATGGCGGGAAGAATGAGAGTGAAGGAGGAAGAGGAGACTGTGGTTTTGTGTGGGAGCGGACCAGGTGGTTCATCTTCTTCATCAAGCGTGTCACCGCAACCCATGGAAGGGTTGCACGATGTGGGACCACCACCGTTTCTGACGAAGACCTTCGAAGTGGTGGAGGATCCTTCCACCGACTCCATTGTTTCTTGGAGCAGAGCTCGCAACAGCTTCGTTGTGTGGGACTCGCACAGATTCTCCACCACGATCTTGCCTCGTTACTTCAAGCACAACAACTTCTCCAGCTTCGTTCGCCAACTCAACACTTACGGGTTTAGGAAAGTGGATCCTGATCGATGGGAATTTGCGAACGAGGGGTTCTTGGCAGGGCAGAAGCACTTGTTGAGGACGATAAAGAGGAGGAGGAATGTGACGCAGTCGTCAACGAACACGATCCAGCATGGAGAAGGAGGAGGAGGAGGAAGTTGTGTTGAGTTAGGTGAGTTTGGTTTGGAAGGTGAGATAGAGAGGCTGAGAAGGGATAGGACGGTGTTAATGGCGGAGATCGTGAAGCTGAGGCAGCAACAGCACAACTCAAGGGAGCGGATTTGTTCAATGGAGTCAAGGTTGCAAGTCACAGAGAAGAAACAAACTCAGATGATGACTTTCCTGGCCAAAGCACTCCACAACCAGTCTTTCATTCATAACCTTTCTCTTCAGAACAGAGAATTACAGGGTTTTGAGATGAGCAGGAAGAGGAGAATAACTGCTACCGCAAGTGTGGAGAATCTGCAAGAGGATCCTGTTGCTGTTGAAGAGCAAGAGGAATTGACGAGTATTGGGTGTGAGATAGAGACACTTTTGTCAAGTGCTTGCGATAATGAATCAAGCAGTGAAATGAAGGAGCCTACTGCTGCTGCTGCTGCTGCTACCAGTGAGAATATATGGGAAGATTTGCTTAGTGAGGATTTAGTTGGTGGGAATCCGGAGGATGAAGTTGTCATTGGTGATTACCCACACCAAAATCTTGAAGATTTGGCTGCAACAAACACTGGCAACTTGAGAAGAAGATAA 1056 0.4839 MAGRMRVKEEEETVVLCGSGPGGSSSSSSVSPQPMEGLHDVGPPPFLTKTFEVVEDPSTDSIVSWSRARNSFVVWDSHRFSTTILPRYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLAGQKHLLRTIKRRRNVTQSSTNTIQHGEGGGGGSCVELGEFGLEGEIERLRRDRTVLMAEIVKLRQQQHNSRERICSMESRLQVTEKKQTQMMTFLAKALHNQSFIHNLSLQNRELQGFEMSRKRRITATASVENLQEDPVAVEEQEELTSIGCEIETLLSSACDNESSSEMKEPTAAAAAATSENIWEDLLSEDLVGGNPEDEVVIGDYPHQNLEDLAATNTGNLRRR* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0867 351 PRINTS Heat shock factor (HSF) domain signature 84 96 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy8g0867 351 PRINTS Heat shock factor (HSF) domain signature 97 109 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy8g0867 351 PRINTS Heat shock factor (HSF) domain signature 46 69 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy8g0867 351 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 25 319 IPR027725 -
Ahy8g0867 351 Gene3D - 39 136 IPR036388 -
Ahy8g0867 351 MobiDBLite consensus disorder prediction 19 34 - -
Ahy8g0867 351 SMART hsfneu3 42 135 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy8g0867 351 SUPERFAMILY "Winged helix" DNA-binding domain 42 135 IPR036390 -
Ahy8g0867 351 MobiDBLite consensus disorder prediction 1 38 - -
Ahy8g0867 351 ProSitePatterns HSF-type DNA-binding domain signature. 85 109 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy8g0867 351 Coils Coil 169 189 - -
Ahy8g0867 351 Pfam HSF-type DNA-binding 46 135 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy8g0867 351 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 25 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0867 Ahy-Chr8 16897140 16899596 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0867 32 341 HSF AT2G26150 52.174 2.50e-118 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Ahy8g0867 HSF_DNA-bind 2.60E-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0867 K09419 - gmx:100794605 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3155 17 133307647 133309742 Ahy8g0867 8 16897140 16899596 hybridization
Ahy16g3303 16 149928856 149931701 Ahy8g0867 8 16897140 16899596 PCT
Ahy6g2601 6 111224868 111227748 Ahy8g0867 8 16897140 16899596 PCT
Ahy8g0867 8 16897140 16899596 Ahy16g3303 16 149928856 149931701 PCT
Ahy8g0867 8 16897140 16899596 Ahy6g2601 6 111224868 111227748 PCT