Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0848 ATGAGTAGTGATAAGAATAAAAAAGCAGCAGATTCACCTGAAAGCGGTGATTCCAGCAACCAGTGGTTCTTTGAGCTCTCTGACTACTTGAAGCTGAATGATGATGATGATGATCAATGGCCAGACGATGATAATGTTCCACCACCACTACCAGAAGCAGAGCCATTATTTTTTCCCAATACTAATGAAGTTGGAGATTTTGGAGCAAGTGGCAGCGGCAGTAACCACCTTCAAGGGTCTTCTAATGCTCGAGAGGTTAGTGGAAGTGAGAAGAAAGATGCTAGTAGGGAGAGAGTTGCATTCAAAACCAAGTCCGAGGTTGAAATACTAGACGATGGTTACAGGTGGAGGAAGTATGGAAAGAAAATGGTTAAGAACAGCCCAAACCCAAGAAACTACTATAGGTGTACAGTGGATGGATGTCCGGTAAAGAAGAGAGTTGAAAGAGACAGGGAAGATCCCACATATGTAATTACAACCTACGAAGGAAATCATACTCACCCAACATCGTAG 513 0.4288 MSSDKNKKAADSPESGDSSNQWFFELSDYLKLNDDDDDQWPDDDNVPPPLPEAEPLFFPNTNEVGDFGASGSGSNHLQGSSNAREVSGSEKKDASRERVAFKTKSEVEILDDGYRWRKYGKKMVKNSPNPRNYYRCTVDGCPVKKRVERDREDPTYVITTYEGNHTHPTS* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0848 170 Gene3D WRKY domain 97 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy8g0848 170 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 10 169 - -
Ahy8g0848 170 MobiDBLite consensus disorder prediction 65 85 - -
Ahy8g0848 170 SUPERFAMILY WRKY DNA-binding domain 103 169 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy8g0848 170 MobiDBLite consensus disorder prediction 1 21 - -
Ahy8g0848 170 ProSiteProfiles WRKY domain profile. 105 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy8g0848 170 Pfam WRKY DNA -binding domain 111 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy8g0848 170 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 10 169 IPR044810 GO:0003700
Ahy8g0848 170 MobiDBLite consensus disorder prediction 33 98 - -
Ahy8g0848 170 SMART WRKY_cls 110 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0848 Ahy-Chr8 16682464 16684396 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0848 35 169 WRKY Transcription Factor Family AT5G26170 50.000 4.80e-45 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy8g0848 WRKY 4.70E-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0848 - - adu:107461015 329.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3136 17 133079909 133081676 Ahy8g0848 8 16682464 16684396 hybridization