Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0843 ATGAGTTTGAGAACCGCAGAGGACGATTCTTCGCCGTCGGAGATTCATCTTCCGGCAGAGATAGACTGGCACATGCTCGACAAGTCCAAGTTCTTCTTCCTCGGCGCCGCCTTATTCTCCGGCGTGTCCGCCGCACTTTACCCCATGGTTGTCCTGAAAACTCGGCAGCAAGTTTCTTCTGCAAAATACTCGTGCCTGAACATGTCCTGCGCCATTATGCGCTACGAAGGTTTCAGAGGCTTCTACAAAGGTTTCGGAACTTCTCTGATGGGAACTATCCCAGCTCGCGCACTCTACATGGCGGCACTCGAAGTCACAAAGAGCAATGTCGGAACCGGCCTCATCGAATTGGGTTTCTCCGACACCACAGCCGCCGCCATGTCTAACGCCGCCGCAGGTGTTACCTCTGCAATGGCGGCGCAACTCGTGTGGACCCCAATCGATGTTGTGAGCCAGAGACTGATGGTTCAAGGATGCAGCAGCAATGGCGGTAGCAACAACAGCATGCTGAGAAACCTCAACTCAGAGAATTACAGGAACGGCATTGATGCTTTCAGGAAGATTCTGTGTGCCGATGGAGCCAGAGGGTTCTACAGAGGATTCGGTATTTCGATATTAACATACGCGCCTTCGAATGCAGTTTGGTGGACTTCATATTCAATGGTGCATAGAGTTATATGGAGTGCATTTGGTTGTTACATGTGTGACAATAGCAGCAATAATTTTAGGCCTGATTCAAGGGCCATGCTTGGAGTGCAAGGTTTGAGTGCGGTTGTCGCAAGTGGGGTGTCGGCGATTGTCACAATGCCGCTTGACACCATCAAGACCAGGTTGCAGGTTTTGGATGCGGACGACAATGGAAGAAGGAGGCCGTTGACTTTTGGTCAAACCATAAGGAACTTGGTTAAGGAAGGTGGTCTTTTAGCTTGTTACAGAGGCTTGGCTCCAAGGTGGGCTTCAATGTCCATGTCTGCTACAACCATGATCACTACCTACGAGTTCTTGAAACGCTTGTCTACTAAGTCTCAAGAAAAATTTACTTGA 1044 0.499 MSLRTAEDDSSPSEIHLPAEIDWHMLDKSKFFFLGAALFSGVSAALYPMVVLKTRQQVSSAKYSCLNMSCAIMRYEGFRGFYKGFGTSLMGTIPARALYMAALEVTKSNVGTGLIELGFSDTTAAAMSNAAAGVTSAMAAQLVWTPIDVVSQRLMVQGCSSNGGSNNSMLRNLNSENYRNGIDAFRKILCADGARGFYRGFGISILTYAPSNAVWWTSYSMVHRVIWSAFGCYMCDNSSNNFRPDSRAMLGVQGLSAVVASGVSAIVTMPLDTIKTRLQVLDADDNGRRRPLTFGQTIRNLVKEGGLLACYRGLAPRWASMSMSATTMITTYEFLKRLSTKSQEKFT* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0843 347 ProSiteProfiles Solute carrier (Solcar) repeat profile. 248 338 IPR018108 -
Ahy8g0843 347 Gene3D Mitochondrial carrier domain 29 346 IPR023395 -
Ahy8g0843 347 PRINTS Mitochondrial carrier protein signature 198 216 IPR002067 GO:0055085
Ahy8g0843 347 PRINTS Mitochondrial carrier protein signature 36 49 IPR002067 GO:0055085
Ahy8g0843 347 PRINTS Mitochondrial carrier protein signature 257 279 IPR002067 GO:0055085
Ahy8g0843 347 Pfam Mitochondrial carrier protein 254 342 IPR018108 -
Ahy8g0843 347 Pfam Mitochondrial carrier protein 40 109 IPR018108 -
Ahy8g0843 347 Pfam Mitochondrial carrier protein 126 227 IPR018108 -
Ahy8g0843 347 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 345 - -
Ahy8g0843 347 SUPERFAMILY Mitochondrial carrier 24 335 IPR023395 -
Ahy8g0843 347 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 345 - -
Ahy8g0843 347 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 225 IPR018108 -
Ahy8g0843 347 ProSiteProfiles Solute carrier (Solcar) repeat profile. 27 109 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0843 Ahy-Chr8 16623002 16624641 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0843 4 344 Chloroplast and Mitochondria Gene Families AT5G26200 65.982 7.20e-160 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0843 K15121 - gmx:100784202 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3132 17 133048418 133050255 Ahy8g0843 8 16623002 16624641 hybridization