Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0774 ATGGAGATCTTCTATGACGATCACCATGATTTCTTAGAGGAACTCATGGCTCTAAGAAGAGAAACATTCACGGAAACCAATTACAACAACACCACCACTTTTCATTCTTCTTTTCCCCCAAACTCTTCTTCTTCTTCTTACCAACAAGAAGATCTTATTCTTTCTCATCAAATTTATGACGACAACAACTTCTTCAACCAAATATATGATTCCTTGTTGTTTGACGAACAATCTCCGCCGCCATTGATGATGGATCATTATTCTTCTTCCTCGTACTACAGTAATAACACCAGCAGCAACCTTGATTCTTATTATCCTCCATTGTCGTTCATGGAAGAAGAGGAGCTTCAGAATTTGGAGATTGAAACGGCAACAAGGTGTAAAGTGGAGCCAGTAGTAACTGTAACTTGCTGTGATTCTGAGTCCCCTGCTGCGATTTTCAACGCAGATTCTGTCATGGGAAATAAGGAAATTAGAAAGAACAACAGGTCAACAAAGAAGGTTGTGGGTCAACCCTCCAAGAATCTTATGGCGGAAAGGAGAAGAAGAAAGAGACTTAATGATAGACTCTCAATGCTAAGAGCCATTGTCCCCAAGATTAGTAAGATGGATAGAACATCAATACTTAGAGACACCATTGATTACATAAAAGAGCTTCTAGAGAAGATCAACAATTTGCAACAAGAAGCTGTAAAAGTTGAAGATTCAAACATGGCAGGTGGCATTTTCAAAGATGTAATTAAACCAAATGAAATCTTGATTAGAAATTCACCCAAGTTTGAGGTTGAGAGGGGTGTGGATAATACAAGGGTTGAGATTTGCTGTGCGGGGAAGCCAGGAATGTTGCTTTCAACAGTTAACACCTTGGAAGCATTAGGCCTTGACATTCAACAATGTGTTATAAGCTGTTTCAATGATTTCACAATGCACGTTTCTTGCTCAGAGGAACCAGAGCAAAGGGCAATGCTGAGTTCTGAAGATATAAAGCAAGCGTTATTTAGAAGTGCTGGATACGGAGGAAGATGCTTGTGA 1032 0.3953 MEIFYDDHHDFLEELMALRRETFTETNYNNTTTFHSSFPPNSSSSSYQQEDLILSHQIYDDNNFFNQIYDSLLFDEQSPPPLMMDHYSSSSYYSNNTSSNLDSYYPPLSFMEEEELQNLEIETATRCKVEPVVTVTCCDSESPAAIFNADSVMGNKEIRKNNRSTKKVVGQPSKNLMAERRRRKRLNDRLSMLRAIVPKISKMDRTSILRDTIDYIKELLEKINNLQQEAVKVEDSNMAGGIFKDVIKPNEILIRNSPKFEVERGVDNTRVEICCAGKPGMLLSTVNTLEALGLDIQQCVISCFNDFTMHVSCSEEPEQRAMLSSEDIKQALFRSAGYGGRCL* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0774 343 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 14 343 - -
Ahy8g0774 343 PANTHER DNA BINDING PROTEIN 14 343 - -
Ahy8g0774 343 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 170 219 IPR011598 GO:0046983
Ahy8g0774 343 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 173 232 IPR036638 GO:0046983
Ahy8g0774 343 Coils Coil 209 236 - -
Ahy8g0774 343 CDD ACT_UUR-ACR-like 269 332 - -
Ahy8g0774 343 Gene3D - 158 237 IPR036638 GO:0046983
Ahy8g0774 343 Pfam Helix-loop-helix DNA-binding domain 176 219 IPR011598 GO:0046983
Ahy8g0774 343 SMART finulus 176 225 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0774 Ahy-Chr8 15340099 15343092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0774 163 343 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 61.878 2.70e-68 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy8g0774 HLH 1.20E-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0774 - - gmx:100812578 328.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1659 17 36740687 36743266 Ahy8g0774 8 15340099 15343092 hybridization