Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0766 ATGTCTACCCAAGGGGTGCGGTTGCACATTCAAGATCGCTATGTGGTGATGGATAATGGTATAGTTCAAGTGACGTTATCGAATCCAGGTGGAATTGTTACTGGGATAGCATATAATGGTGTTGATAATTTGCTTGAAGTTCTCAACAAGGAGACTAATAGAGGGTACTGGGATCTTGTTTGGGGTGCACCAGGAATCAAAGGAACCTTTGATGTGATTCAAGGAACGTTTTTCAGAGTTATAGTTCAAAATGATGAACAAGTTGAGGTTTCATTTACAAGAATGTGGGATCCTTCTCTTGAGGGAAAGTTTGTCCCCTTAAACATTGACAAAAGATTCATACTGCTCCGAGGTTCATCAGGCTTCTACTCTTATGGAATTTATGAGCACTTAAGTGGATGGCCAGACTTCGATCTTAGTGAAACAAGGATCACTTTCAAGCTTAGAAAACACATGTTTCAATACATGGCTATGGCAGACAACAGGCGAAGGCTTATGCCTCTTCCGGATGATCGATTACCAGGGAGATGCCAAACCTTGGCATACCCAGAAGCTGTCAAATTAGTCAATCCCAAGGATCCTCAACTGAAAGATGAGGTGGATGACAAGTATCAATATTCCTGCGACAACATAGATAATAAAGTCCATGGGTGGATATCTTTCAATCCACCAGTGGGATTTTGGCAGATCACACCAAGTGATGAGTTTCGTTCTGGTGGACCGCACAAGCAGAATTTGACCTCACATGTAGGCCCCACCACACTTGCAATGTTTCTTAGTGGTCACTATGCGGGGCAAGATTTGAACCCCAAATTCAAAGATGGTGAACCATGGAAGAAGGTTTTTGGTCCAGTATTCATATATCTTAATTCTGGACCAGTTGGTGATGACCCACATTGGCTCTGGGAGGACGCCAAAATACAGATGATGAATGAAGTTCAAAGCTGGCCATATTCTTTCCCAGCTTCAGAGGATTTTCCAAAGTCGGATCAAAGGGGCAACGTTGGTGGCAGACTGCTCGTCTTAGACAGATATGTCAGCACAGACTTAATATCTGCAAATGGTGCTTATGTTGGTCTAGCCCCGCCAGGAGATGCCGGGTCATGGCAAAGAGAATGCAAGCACTATCAATTCTGGACCAGAGCAGATGAGAATGGATTTTTTACAATCAGGAACATACGTGCTGGCGACTATAACCTTTATGCCTGGGTTCCTGGTTTTGTTGGGGACTACAAATTGGATGATTTGATGAAGATAACCCCAGGTTCTAATATTGAAGTGGGTGAACTGGTATATGAGCCTCCAAGGGTTGGTCCAACATTGTGGGAAATAGGTATTCCTGATCGAACTGCTGCAGAATTTTATGTTCCTGATCCCAAGCCAGAACATATTAATAAGCTTTTTATCAACCATCCTGAAAGGTTCAGACAGTACGGATTATGGGAAAGGTATATAGAATTGTATCCGGAATCAGATTTGGTTTACACAGTTGGTGTCAGTGACTATAGGAGAGATTGGTTTTATGCCCATATTCCCAGAAAGAAAGAGGATAATACCCATCAAGGAACAACTTGGCAAATCAAGTTTGAACTCAATGATGTGGTTCAAGGAAGTACTTATACACTGAGAGTTGCAATTGCATCTGCAACATTAGCTGAATTGCAGATTCGAGTAAATGATCCGAATGCAAGGCGTCCTCTGTTTACGACTGGGCTAATAGGGAGGGATAACTCGATTGCAAGACATGGAATTCATGGACTCTATTGGCTGTACAGTGTGAATGTACCTGGTTCTCTTCTTATAAATGGCCCCAACACTTTATATTTTACTCAACCACGTTGCAACAATTGTTTCCAGGGTATCATGTATGATTATATTCGTATGGAAGGACCTCCTTGA 1899 0.4239 MSTQGVRLHIQDRYVVMDNGIVQVTLSNPGGIVTGIAYNGVDNLLEVLNKETNRGYWDLVWGAPGIKGTFDVIQGTFFRVIVQNDEQVEVSFTRMWDPSLEGKFVPLNIDKRFILLRGSSGFYSYGIYEHLSGWPDFDLSETRITFKLRKHMFQYMAMADNRRRLMPLPDDRLPGRCQTLAYPEAVKLVNPKDPQLKDEVDDKYQYSCDNIDNKVHGWISFNPPVGFWQITPSDEFRSGGPHKQNLTSHVGPTTLAMFLSGHYAGQDLNPKFKDGEPWKKVFGPVFIYLNSGPVGDDPHWLWEDAKIQMMNEVQSWPYSFPASEDFPKSDQRGNVGGRLLVLDRYVSTDLISANGAYVGLAPPGDAGSWQRECKHYQFWTRADENGFFTIRNIRAGDYNLYAWVPGFVGDYKLDDLMKITPGSNIEVGELVYEPPRVGPTLWEIGIPDRTAAEFYVPDPKPEHINKLFINHPERFRQYGLWERYIELYPESDLVYTVGVSDYRRDWFYAHIPRKKEDNTHQGTTWQIKFELNDVVQGSTYTLRVAIASATLAELQIRVNDPNARRPLFTTGLIGRDNSIARHGIHGLYWLYSVNVPGSLLINGPNTLYFTQPRCNNCFQGIMYDYIRMEGPP* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0766 632 Pfam Polysaccharide lyase family 4, domain III 440 628 IPR029411 -
Ahy8g0766 632 CDD RGL4_N 6 292 - -
Ahy8g0766 632 Pfam Rhamnogalacturonate lyase family 6 200 IPR010325 -
Ahy8g0766 632 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 1 632 - -
Ahy8g0766 632 CDD RGL4_M 331 430 IPR029413 -
Ahy8g0766 632 Gene3D - 8 304 IPR014718 GO:0030246
Ahy8g0766 632 Pfam Polysaccharide lyase family 4, domain II 354 426 IPR029413 -
Ahy8g0766 632 Gene3D - 329 427 - -
Ahy8g0766 632 SUPERFAMILY Galactose mutarotase-like 18 296 IPR011013 GO:0003824|GO:0005975|GO:0030246
Ahy8g0766 632 CDD RGL4_C 442 629 - -
Ahy8g0766 632 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 1 632 - -
Ahy8g0766 632 SUPERFAMILY Starch-binding domain-like 373 427 IPR013784 GO:0030246
Ahy8g0766 632 Gene3D - 437 629 - -
Ahy8g0766 632 SUPERFAMILY Galactose-binding domain-like 438 629 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0766 Ahy-Chr8 15196869 15202770 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0766 1 632 Polysaccharide Lyase AT1G09910 70.411 0.0 954
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0766 K18195 - gmx:100814185 1134.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1696 17 39127592 39150163 Ahy8g0766 8 15196869 15202770 hybridization