Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0763 ATGAACAACTACTTCTTCTTCCTCTTCCTCTTCTTCATCTCTTCTTTTACCTATTCATCAGGGATGCGCTTGGACATTCACGATAAACATGTGGTTATGGATAATGGCATAGTTGAGGTCACTATATCAAATCCTGAAGGATTTGTTACAGAGATTCGGTATAATGGAATCGACAATTTGCTTGAACTTCTTAACAAGGAATCTAACCGAGGGTACTTCGATATGGTGTGGGATGAAGGTAAGTCAAAGAGGAAAAAAGGTGAATTTGACAGAATGGAAGCTACAAATATGAGTGTGATAGTGGAAAATGAGGAACAAGTGGAGCTATCATTCACAAGAATGTGGAATTCTTCTCTTCAGGGATTGTATCCCCCACTCAACATTGATAAAAGGTTCCATTACATGGTGGTAGCAGGGGACAGACAGAGATTTATGCCTCTTCCTGATGATAGAGAAGAAGGAAGAGGCCAAGTTCTTGCTTATCCTGAAGCTGTCTTGCTTGTCAATCCTATTGAGCCTCAATTCAAAGGAGAGGTGGATGACAAGTATCAATATTCATGTGAGAGCAGAAACAACGAAGTTCATGGTTGGATATCCATGGATCCACCCAAATCCACCGGCTTCTGGATCATCACCCCAAGCAATGAGTTCCGATCCGGCGGCCCCCTCAAACAATATCTCGCTTCTCACGTCGGCCCCACTTCCTTATCCGTATTTCATAGCACACACTATTCCGGGGTAGATCTGATAATGAGGTTTAGGCCCAATGAAGCCTGGAAGAAAGTATATGGGCCCATATTTATATATCTTAATTCACTCTCTAATGGAGAAAGCCCAACAGGGCTCTGGGACGACGCCAGACAACAGATGGTGAATGAAATTGAAAGCTGGCCCTATAAGTTTCCAGCTTCAGAGGATTTTGTGAAAGCTGAGCAAAGGGGTCAAGTTGAAGGAAGATTGCTTGTCCGTGACAGGTACATGAGTGATGCATTCATCCCAGTTAGCAGTGCTTCTGTGGGATTAGCTTCTCCAGGAGAGCCTGGCTCTTGGCAAAGGGAATCCAAGGGTTATCAATTTTGGACCATTACTGATGATAAAGGCTATTTCTCAATTACTAACATACTCCCTGGGAAATATAATGTCTACTCCTGGGTCAAAGGATACATTGGTGACTATAAATATGATAAAGTCATTAACATAACTTCAGGGAGTGAAGTTAATGTGGGTGAAATTGTTTATGAGGCACTAAGAGAAGGTGCTACTTTGTGGGAAATAGGTATACCTGATCGTTCTGCTGCTGAGTTCTATGTTCCTGATCCTAACCCCAAATACATTAACAGAATTTATGTCAACCATACAGATAGGTATAGGCAATATGGGTTGTGGGAGAGATATGCTGATTTGTATCCAAAAGAAGACTTAGTATACAATGTTGGCACAAGTGACTATACAAAAGATTGGTTCTTTGCTCAGGTTAACAGGAAGAAGGGAAATAAGACATACCAAGCAACCACTTGGCAAATTAATTTCAATTTGGAAAATGTGAATGCCAATGGAACTTACAAATTGCGAGTGGCTCTGGCCTCTGTACATTATGCCGAGTTACAGATTCGGGTGAAGAATTCATCAGAAGCAAATCCACCATTATTTACAAGTGGAGTTATTGGATCAGAAAACACCATAGCTAGACATGGAATTCATGGGTTCTATTGGCTTTTCAACGTTGATATAAAAGGCACTCTTCTTGCACAGGGAAATAATTCAATCTTTTTTTCACAACCCAATAATTCAAGTCCCTTTCAAGGAATTTTGTATGATTATATTCGTCTAGAAGCACCACCCCATCACACAAATTTCACACCAAAATTAAATATTCTTCCAAATTAA 1887 0.4059 MNNYFFFLFLFFISSFTYSSGMRLDIHDKHVVMDNGIVEVTISNPEGFVTEIRYNGIDNLLELLNKESNRGYFDMVWDEGKSKRKKGEFDRMEATNMSVIVENEEQVELSFTRMWNSSLQGLYPPLNIDKRFHYMVVAGDRQRFMPLPDDREEGRGQVLAYPEAVLLVNPIEPQFKGEVDDKYQYSCESRNNEVHGWISMDPPKSTGFWIITPSNEFRSGGPLKQYLASHVGPTSLSVFHSTHYSGVDLIMRFRPNEAWKKVYGPIFIYLNSLSNGESPTGLWDDARQQMVNEIESWPYKFPASEDFVKAEQRGQVEGRLLVRDRYMSDAFIPVSSASVGLASPGEPGSWQRESKGYQFWTITDDKGYFSITNILPGKYNVYSWVKGYIGDYKYDKVINITSGSEVNVGEIVYEALREGATLWEIGIPDRSAAEFYVPDPNPKYINRIYVNHTDRYRQYGLWERYADLYPKEDLVYNVGTSDYTKDWFFAQVNRKKGNKTYQATTWQINFNLENVNANGTYKLRVALASVHYAELQIRVKNSSEANPPLFTSGVIGSENTIARHGIHGFYWLFNVDIKGTLLAQGNNSIFFSQPNNSSPFQGILYDYIRLEAPPHHTNFTPKLNILPN* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0763 628 PANTHER RHAMNOGALACTURONATE LYASE B-LIKE PROTEIN 131 612 - -
Ahy8g0763 628 PANTHER RHAMNOGALACTURONATE LYASE B-LIKE PROTEIN 4 132 - -
Ahy8g0763 628 SUPERFAMILY Galactose-binding domain-like 419 611 IPR008979 -
Ahy8g0763 628 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 131 612 - -
Ahy8g0763 628 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 4 132 - -
Ahy8g0763 628 Pfam Rhamnogalacturonate lyase family 26 132 IPR010325 -
Ahy8g0763 628 Pfam Polysaccharide lyase family 4, domain II 336 407 IPR029413 -
Ahy8g0763 628 Pfam Polysaccharide lyase family 4, domain III 421 610 IPR029411 -
Ahy8g0763 628 Gene3D - 167 284 IPR014718 GO:0030246
Ahy8g0763 628 CDD RGL4_M 312 411 IPR029413 -
Ahy8g0763 628 CDD RGL4_C 423 611 - -
Ahy8g0763 628 SUPERFAMILY Starch-binding domain-like 309 409 IPR013784 GO:0030246
Ahy8g0763 628 CDD RGL4_N 22 272 - -
Ahy8g0763 628 Gene3D - 308 409 - -
Ahy8g0763 628 Gene3D - 418 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0763 Ahy-Chr8 15142780 15164670 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0763 20 613 Polysaccharide Lyase AT1G09890 60.601 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0763 K18195 - gmx:100786488 952.584