Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0728 ATGAAAGGAGAATATGTAGAACACCACCACCCTCCAAAGAGTGAACCACCAAACATGTTCTCAAAGCTTCACCACCAATCACCACCACATCAACATCAACATCAACATCAGCAGCATCCATTTTCTCTTCATAATCCATTCCAACACTTCTCAAGGGATCAATGCCAAGCTTCTGCGGCGCCGGAAGAAGATAGCCATGGTGGAGGCGGTGTAGGCGGCGCCGCCACTTCTCAGAAGCCGAACTCCTCCGGCGACGGAGCAACCATAGAGGTTGTGAGGAGGCCAAGAGGTCGCCCGCCGGGCTCCAAGAACAAGCCTAAACCGCCAGTGATCATAACGCGTGAGCCCGAGCCCGCCATGAGTCCGTACATTCTAGAAGTTTCCAGCGGAAACGACGTCGTTGAAGCGTTAGCCAGGTTCAGTCGGAGGAGGAACATGGGGATTTGCGTCCTTACTGGATCCGGAACCGTTGCTAACGTCACTCTCCGTCAGCCAGGAGCAGCTCCCGGAGCCACCGTTACGTTTCACGGCCGATTCGATATCTTATCTGTTTCCGCCACGTTTCTTCCGCAGCCGTCGCCCGCGGTTCCTACCGCCTTCGCCATCTCGCTTGCCGGACCGCAGGGGCAGATCGTCGGAGGACACGTCGCCGGAGGACTTATGGCTGCCGCCACGGTGTTTGTTGTGGCGGCTTCGTTCAACAATCCTTCGTTTCATAGGCTGCCGCCGGAGGAGGATGCTCGGAACGATGTTTCCGGCGGGGACGGTCAGTCTCCGGCGGTTTCTGGTGGTGGTGGTGAGAGCGGGCATGGTCAGGCGGTGGATTCGTGTGGGATGTCGATGTATAGCGGCGTTCATCATCACTTGCCGGCGGCAGCGTCTTCCGATGTGATATGGACTCCGACGGCAAGGGCGCCACCACCTCCTTATTGA 933 0.5734 MKGEYVEHHHPPKSEPPNMFSKLHHQSPPHQHQHQHQQHPFSLHNPFQHFSRDQCQASAAPEEDSHGGGGVGGAATSQKPNSSGDGATIEVVRRPRGRPPGSKNKPKPPVIITREPEPAMSPYILEVSSGNDVVEALARFSRRRNMGICVLTGSGTVANVTLRQPGAAPGATVTFHGRFDILSVSATFLPQPSPAVPTAFAISLAGPQGQIVGGHVAGGLMAAATVFVVAASFNNPSFHRLPPEEDARNDVSGGDGQSPAVSGGGGESGHGQAVDSCGMSMYSGVHHHLPAAASSDVIWTPTARAPPPPY* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0728 310 SUPERFAMILY AF0104/ALDC/Ptd012-like 119 245 - -
Ahy8g0728 310 PIRSF ESCAROLA 17 309 IPR014476 GO:0003680
Ahy8g0728 310 MobiDBLite consensus disorder prediction 1 15 - -
Ahy8g0728 310 Gene3D - 121 251 - -
Ahy8g0728 310 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 22 309 IPR014476 GO:0003680
Ahy8g0728 310 MobiDBLite consensus disorder prediction 238 275 - -
Ahy8g0728 310 MobiDBLite consensus disorder prediction 33 55 - -
Ahy8g0728 310 Pfam Plants and Prokaryotes Conserved (PCC) domain 122 235 IPR005175 -
Ahy8g0728 310 MobiDBLite consensus disorder prediction 1 114 - -
Ahy8g0728 310 CDD DUF296 122 220 IPR005175 -
Ahy8g0728 310 ProSiteProfiles PPC domain profile profile. 117 254 IPR005175 -
Ahy8g0728 310 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 22 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0728 Ahy-Chr8 14328765 14330593 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0728 1 308 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 56.289 1.24e-95 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0728 - - adu:107460948 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1733 17 42054236 42055715 Ahy8g0728 8 14328765 14330593 hybridization