Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0709 ATGGAATTTGACGAGCACGAAGACCAAGAGGAAGAGGAAATGGGGATCCCGGAGCCGCCGCCTGCGCCGCAGGGTTATGACTCGTTTGGAAACTCGGCGGCGAGGTCCAAATCAGAAGGAGGAGGAGGAGGAGCTGCCGCCGTGACACCTGGTCGGAAAGGTGGAACCGCCGTCAGGTACAGAGAATGTCAGAAGAATCACGCGGTCAGTATCGGCGGCCACGCCGTTGACGGTTGCTGCGAGTTTCTAGCCGCCGGAGAGGAAGGAACACTGGAGGCCGTGATCTGCGCTGCCTGCAACTGCCACCGCAATTTCCACCGCAAAGAGATCGACGGCGAGACAAGCCCCTACCACCAGAACACTCCTCGGCCTCAGCAACCGCCGCAACCGCCTCTGCATCACCACCAGTACCACCAACACCATCAATTCTCCCCTTACTACCACCGCGCACCGCCTCCTCCTACCGGCGGATACCTCCACCTGTCAACTCCGCCGGTGTCGCAGCACCGGCCTCTAGCTCTTCCAGCAGCCGCATCAGGCGGCGGTGGATTCTACAAAGAGGAAGAAGACATGTCAAACCCTAGCAGCAGCGGCGGCGGCGGCGGCGGTAGCGGAAGCGGAACAAAGAAGAGGTTTAGAACGAAATTCACACAGGAGCAGAAGGATAAGATGCTTGCATTCGCAGAGCAGTTAGGGTGGAGAATCCAGAAGCATGATGAATCTGCAGTTGAGAATTTCTGCGCTGAAACCGGTGTTAAGAGACATGTTCTCAAGGTTTGGATGCATAACAATAAGCACACTCTCGTCAGGTACTTGCATTGTGTTATGAAGACGAGGTACCTCGTCCACCATTATTATTAA 861 0.5621 MEFDEHEDQEEEEMGIPEPPPAPQGYDSFGNSAARSKSEGGGGGAAAVTPGRKGGTAVRYRECQKNHAVSIGGHAVDGCCEFLAAGEEGTLEAVICAACNCHRNFHRKEIDGETSPYHQNTPRPQQPPQPPLHHHQYHQHHQFSPYYHRAPPPPTGGYLHLSTPPVSQHRPLALPAAASGGGGFYKEEEDMSNPSSSGGGGGGSGSGTKKRFRTKFTQEQKDKMLAFAEQLGWRIQKHDESAVENFCAETGVKRHVLKVWMHNNKHTLVRYLHCVMKTRYLVHHYY* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0709 286 MobiDBLite consensus disorder prediction 1 15 - -
Ahy8g0709 286 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 60 109 IPR006456 -
Ahy8g0709 286 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 59 110 IPR006456 -
Ahy8g0709 286 MobiDBLite consensus disorder prediction 1 53 - -
Ahy8g0709 286 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 195 268 - -
Ahy8g0709 286 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 32 195 - -
Ahy8g0709 286 SUPERFAMILY Homeodomain-like 195 268 IPR009057 -
Ahy8g0709 286 Pfam ZF-HD protein dimerisation region 58 110 IPR006456 -
Ahy8g0709 286 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 32 195 - -
Ahy8g0709 286 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 195 268 - -
Ahy8g0709 286 Gene3D - 194 269 - -
Ahy8g0709 286 MobiDBLite consensus disorder prediction 112 210 - -
Ahy8g0709 286 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 209 265 IPR006455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0709 Ahy-Chr8 13887469 13889843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0709 7 271 ZF-HD Transcription Factor Family AT4G24660 51.880 2.72e-70 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Ahy8g0709 ZF-HD_dimer 3.90E-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0709 - - gmx:100820567 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3010 17 130672550 130674517 Ahy8g0709 8 13887469 13889843 hybridization
Ahy17g3010 17 130672550 130674517 Ahy8g0709 8 13887469 13889843 PCT
Ahy7g1713 7 62728224 62732264 Ahy8g0709 8 13887469 13889843 PCT
Ahy8g0709 8 13887469 13889843 Ahy17g3010 17 130672550 130674517 PCT
Ahy8g0709 8 13887469 13889843 Ahy7g1713 7 62728224 62732264 PCT