Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy8g0703 | ATGTCTTCCAATTCGTACCGAGGAGGTTCCGCCTACGGTGATGCCGCCCCTTTCCGATCCAGAGAGGGGCTTAGCACGAGACCCGCTGCTTCCTCCGATGAAATCCAATTGCGCATTGATCCCGTGGACATGGACTTGGACCACGAAATCACCGGTCTTCGCGGCCAAGTCAAAAAGTTGAGAAATGTTGCTCAAGAGATAGGTACAGAAGTAAAGCAGCAGAAGGATTTTTTGGAAGAGCTGCAAACATTGATGACGAACGCTCAAGCCGGGGTTAAGAATAATATAAGAAGATTGAACAAGAGCATTGTTCGAAGTGGTTCAAACCATGTTGTTCATGTGGTTTGTTTTGCATTAATTTGTTTCTTTGTAGTATACGCTTGGTCAAAGATGTTTAGAAAATGA | 405 | 0.4494 | MSSNSYRGGSAYGDAAPFRSREGLSTRPAASSDEIQLRIDPVDMDLDHEITGLRGQVKKLRNVAQEIGTEVKQQKDFLEELQTLMTNAQAGVKNNIRRLNKSIVRSGSNHVVHVVCFALICFFVVYAWSKMFRK* | 135 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy8g0703 | 134 | Gene3D | - | 47 | 109 | - | - | |
Ahy8g0703 | 134 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 40 | 102 | IPR000727 | - | |
Ahy8g0703 | 134 | CDD | SNARE_Qc | 45 | 101 | - | - | |
Ahy8g0703 | 134 | PANTHER | TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED | 9 | 133 | - | - | |
Ahy8g0703 | 134 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Ahy8g0703 | 134 | PANTHER | GOLGI SNARE BET1-RELATED | 9 | 133 | IPR039897 | GO:0015031|GO:0030173 | |
Ahy8g0703 | 134 | SUPERFAMILY | SNARE fusion complex | 34 | 101 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy8g0703 | Ahy-Chr8 | 13803343 | 13805477 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy8g0703 | 60 | 131 | SNARE and Associated Proteins | AT3G45280 | 28.378 | 6.53e-06 | 42.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy8g0703 | K08505 | - | cpap:110816711 | 206.838 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy17g1771 | 17 | 45158810 | 45162788 | Ahy8g0703 | 8 | 13803343 | 13805477 | hybridization | |
Ahy17g3004 | 17 | 130583291 | 130585398 | Ahy8g0703 | 8 | 13803343 | 13805477 | PCT | |
Ahy7g1710 | 7 | 62095818 | 62098607 | Ahy8g0703 | 8 | 13803343 | 13805477 | PCT | |
Ahy8g0703 | 8 | 13803343 | 13805477 | Ahy17g3004 | 17 | 130583291 | 130585398 | PCT | |
Ahy8g0703 | 8 | 13803343 | 13805477 | Ahy7g1710 | 7 | 62095818 | 62098607 | PCT |