Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0660 ATGGGAAGGTCTCCATGCTGCGATGAGAGTGGCCTTAAGAAAGGTCCATGGACTCCTGAAGAAGATCAAAAGCTTGTTCACCACATTCAGAAACATGGCCATGGAAGTTGGAGAGCACTTCCTAAGTTAGCGGGTCTTAATAGATGTGGCAAGAGCTGTAGACTTAGGTGGACTAACTATTTGAGGCCTGATATTAAGAGGGGCAAATTCTCCCAAGAAGAGGAGCAAACCATTCTCCATCTTCATTCCATTCTTGGAAACAAGTGGTCAGCAATTGCGACCCATCTTCCGGGGAGAACAGACAACGAGATAAAGAATTTCTGGAACACTCATTTGAAGAAGAAGCTGATCCAGATGGGTTTTGATCCAATGACTCATCAACCAAGAACTGACCTTGTTTCTACCCTCCCATACCTCATAGCTTTGGCAAGCATGATGGATACATCATCATCAATTGATGAACATGCTCTGAGCTTACAAGCAGAGGCAATTCAAATGGCAAAGCTTCAGTACCTTCATTACTTACTCCAATCTTCCTCATCAAATTCCAACCTTGCCTTGGACCAACAAAACAATCCCATCAACATCACAAACATGGAACCTCCTTTCAGTTTGTTAAATGTGAAAGAGAATATTAATACTAATAATAATAATAATAATAATGGTCCTTCTTCATTTCCTCATCATCATCATCATGGGAATGGGATTCTTATTGATGATGATAGTAGCTGTCAACCACTCCACTACCACCCAAACTTGCTATTATCTCACTTTTTAGACCCACCATCACAACAAGTCTCTTTCAATTCCCAATCATGTTTGAATAATATTAATGAGCAAGGTCAAGGTTCTACTACTAACTATGCAATCATAAGTCAAATGGATCACACAACAGCTGATGATAATTCCTCCTGGATTCTTCCATCTTCTTCTCCATTGTCATCTATTGCTCCAAATAATAATGGACCCTCTACTACTACTAGTAACAATAATAATCCAGGAGATACAAGCAGCACCACTTCTAGCTATGGAGGAGGAGGAGGACCTGCTTCTTCCTCCTCTTCTTATTGGTCTGAACTCTTTCTTGTGGACCCTACTATCATGCATGAGCTACCTTAA 1119 0.4066 MGRSPCCDESGLKKGPWTPEEDQKLVHHIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEQTILHLHSILGNKWSAIATHLPGRTDNEIKNFWNTHLKKKLIQMGFDPMTHQPRTDLVSTLPYLIALASMMDTSSSIDEHALSLQAEAIQMAKLQYLHYLLQSSSSNSNLALDQQNNPINITNMEPPFSLLNVKENINTNNNNNNNGPSSFPHHHHHGNGILIDDDSSCQPLHYHPNLLLSHFLDPPSQQVSFNSQSCLNNINEQGQGSTTNYAIISQMDHTTADDNSSWILPSSSPLSSIAPNNNGPSTTTSNNNNPGDTSSTTSSYGGGGGPASSSSSYWSELFLVDPTIMHELP* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0660 372 CDD SANT 69 112 IPR001005 -
Ahy8g0660 372 SMART sant 13 63 IPR001005 -
Ahy8g0660 372 SMART sant 66 114 IPR001005 -
Ahy8g0660 372 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Ahy8g0660 372 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 360 - -
Ahy8g0660 372 CDD SANT 16 61 IPR001005 -
Ahy8g0660 372 MobiDBLite consensus disorder prediction 299 355 - -
Ahy8g0660 372 PANTHER TRANSCRIPTION FACTOR MYB39-LIKE 1 360 - -
Ahy8g0660 372 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Ahy8g0660 372 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Ahy8g0660 372 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Ahy8g0660 372 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Ahy8g0660 372 Gene3D - 11 67 - -
Ahy8g0660 372 MobiDBLite consensus disorder prediction 214 234 - -
Ahy8g0660 372 Gene3D - 69 116 - -
Ahy8g0660 372 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Ahy8g0660 372 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0660 Ahy-Chr8 13025335 13027053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0660 1 368 MYB Transcription Factor Family AT1G34670 52.010 5.13e-110 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy8g0660 Myb_DNA-binding 2.10E-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0660 K09422 - gmx:100782792 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2958 17 129710795 129712847 Ahy8g0660 8 13025335 13027053 hybridization