Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0626 ATGTCTTCGTCTTCTTCGGCGGCTGCCGCAAATAATTCGCCGTGTGCGGCATGCAAGATTCAGCGTAGAAAGTGCACACAGGAGTGTGTGTTCGCGCCGTACTTCCCGCCGGACAACCCGCAGAGATTTGCGTACGTTCACAAAGTGTTCGGAGCAAGCAACGTGGCAAAACTCCTCAACGACCTGAACGCAGCTCAACGAGAGGATGCAGTGAAGTCACTAGCATACGAGGCGGAGGCGCGTCTCCGTGACCCCGTGTACGGATGCGTAGGCCTCATTTCACTTCTCCAGCACAAGCTCAAACAGCTTCAGGCTGAACTTAACCATGCCAAGACGGAACTCGCAAACTACGTTGTCGTTAACAATAATAATAACGGTTCACCTCACGCGCCTGTTCTCCCGCTCTTTAACAACCAACACCATCAGCAACCGTCTCAACTGAATCGTAACAACCTCTCACATCACTCTCTGCAACCGTTTTCTGTTTCTGTTTCCCCTTTTCAGGAGGCTGTTATGCAGCACCAGCAAGAGATTTTGGGGTTTGAGAACTATATGACGATTGGTTCTTCTTCCGCTGCTTCTGCTGTCTCTCCTTCGCTGGCTCTTGGACCGGTTGATCACAGTTTTCATCACCATCATCATAATCATCACCATAATTTGCAGCAGCAGATTCAGGCGCATCATCAATCTTTTATGTTTCAGAAGCAGGCAAAGTTCGAAGGCGAGGAGGGTAGGAATAGCAGGAGGACTGGTCCTTCTTGTTGCTGA 768 0.5013 MSSSSSAAAANNSPCAACKIQRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNDLNAAQREDAVKSLAYEAEARLRDPVYGCVGLISLLQHKLKQLQAELNHAKTELANYVVVNNNNNGSPHAPVLPLFNNQHHQQPSQLNRNNLSHHSLQPFSVSVSPFQEAVMQHQQEILGFENYMTIGSSSAASAVSPSLALGPVDHSFHHHHHNHHHNLQQQIQAHHQSFMFQKQAKFEGEEGRNSRRTGPSCC* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0626 255 PANTHER LOB DOMAIN-CONTAINING PROTEIN 32-RELATED 11 235 - -
Ahy8g0626 255 Coils Coil 93 120 - -
Ahy8g0626 255 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Ahy8g0626 255 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 235 - -
Ahy8g0626 255 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0626 Ahy-Chr8 12253847 12256286 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0626 9 118 AS2 family AT5G66870 78.182 9.52e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy8g0626 LOB 2.20E-42 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2919 17 128900350 128902789 Ahy8g0626 8 12253847 12256286 hybridization