Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0617 ATGAGCAATTTGATAACCCTGTGTAGGCCTCACACACTGTTCTTCTCTTCTTTCATTACTTGCAGACACCAGTTTCAAACCAGGGCTTCTTCTTTTCGGAACCCTAATTGCAATTCCCGTTTTCCCTCTTTCTCGTTATACTCTTCCTGGCTCATCGATTCCTGGGGTTCGAGCAGGACTGGACTATGGTTTCGCGTTAATCAGAGGAGAACTCTGGCCAAGGCTTCAAATTGGGACGAACAACAATCCCCGTATGAAACCCTTGAATTGGACAGAGATGCTGATGAAGAACAGATAAAGAGCGCTTATCGACGATTGGCTAAATTCTATCATCCAGATGTCTATGATGGTAGAGGATCCCTTGAGGAAGGCGAAACAGCAGAAGCTAGGTTCATTAAGATCCAAGCTGCTTATGAATTGCTTATAGACGATGAGAAGCGAAGACGGTATGATATGGATAACCGAGTCAACCCTATGAAGGCGTCTGAGGCATGGATGGAGTGGCTAATGAAAAAGCGAAAAGCTTTTGATCAACGTGGTGATATGGCAGTTGCTGCTTGGGCTGAGCAGCAACAGCGAGAGTTGAATCTACGTTTCCGTCAACTTTCTCGTTCAAAGATGGATCCTGATGAGGCAAGGAAGATTCTAGCTAGAGAGAAGGCAGCTGCTGCTAAGAATTTCTCCAATACCCTTAAAAGGCACACACTTGTTCTCAAGAAAAGAGATTTGATGAGAAGAAAGGCAGAGCAAGATCAAGATAAACTTATCAGCCAGCTCTTGGCGGCAGAAGGTCTTGAATCAGATAGTGATGAATGA 816 0.4461 MSNLITLCRPHTLFFSSFITCRHQFQTRASSFRNPNCNSRFPSFSLYSSWLIDSWGSSRTGLWFRVNQRRTLAKASNWDEQQSPYETLELDRDADEEQIKSAYRRLAKFYHPDVYDGRGSLEEGETAEARFIKIQAAYELLIDDEKRRRYDMDNRVNPMKASEAWMEWLMKKRKAFDQRGDMAVAAWAEQQQRELNLRFRQLSRSKMDPDEARKILAREKAAAAKNFSNTLKRHTLVLKKRDLMRRKAEQDQDKLISQLLAAEGLESDSDE* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0617 271 SUPERFAMILY Chaperone J-domain 35 150 IPR036869 -
Ahy8g0617 271 SMART dnaj_3 82 146 IPR001623 -
Ahy8g0617 271 Coils Coil 85 105 - -
Ahy8g0617 271 Gene3D DnaJ domain 68 167 IPR036869 -
Ahy8g0617 271 PANTHER CO-CHAPERONE PROTEIN DJLA 64 270 - -
Ahy8g0617 271 CDD DnaJ 84 143 IPR001623 -
Ahy8g0617 271 PANTHER LD30543P 64 270 - -
Ahy8g0617 271 ProSiteProfiles dnaJ domain profile. 83 154 IPR001623 -
Ahy8g0617 271 Pfam DnaJ domain 84 151 IPR001623 -
Ahy8g0617 271 ProSitePatterns Nt-dnaJ domain signature. 131 150 IPR018253 -
Ahy8g0617 271 PRINTS DnaJ domain signature 172 191 IPR001623 -
Ahy8g0617 271 PRINTS DnaJ domain signature 85 103 IPR001623 -
Ahy8g0617 271 PRINTS DnaJ domain signature 103 118 IPR001623 -
Ahy8g0617 271 PRINTS DnaJ domain signature 126 146 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0617 Ahy-Chr8 12026260 12028844 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0617 75 151 C2H2 Transcription Factor Family AT1G74250 37.662 4.38e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0617 - - ahf:112766429 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2904 17 128644105 128646637 Ahy8g0617 8 12026260 12028844 hybridization