Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0602 ATGCATCATCTACCTCCATTTTTTAATTCCAGTAATAGAAATCAACGCAGCAACAACAATTCCATGGATTCAAAGAAGCTCCGAAGGAAGCCCAAGCTCGAGCGCCGCAATGCCGTCAAGTACGTTGACTACGACGCCGACGGCTCCACCACCTCCTCACACGATGATTCCTCTTCCTCCGTCGGTGGCGGAAGCAGAAGCGATTCCATTTACACCCGATCCATGGATTTCTACGACCGAACTAGCTTCCGAATTGAGGGAACCGAGGGCGAGTTTGACCGGATTTGCCGGAGCTTGGGGCTCTCCGGCCCGGAGGACTTCGCCATACCGGCGGCGGCCTGGGAAGCCATGAAGGTCCGGTCGTCATCGGATATTCTCCCGAGGCTGAATCCGAGGGAAGAGCGAGTGCCACCGCGGCGGAGCGACGTCGTTGCGGTGGGTGAATTGGCCAAGGAATTCGAAGGTGGAGCTAGGGTTAGGGTTGATGAGACCGGTGGTTGCTGCGCGGAGAGCTCCAGTGGCATATGCGGAGGAATCAAAGGTGTTCGTCCGCCGATGCTTAGGCCGCCGCCGGGGACCAAGGTGCCTGTGGTGGACAACACAAGCTCCACTTGGGACCTTCTAAGGGACTTTGCTCCAGAAGGTTCAGACAACGGCCACTTACTACAGATAGAACCAGATAAAGAAGACGAAGAAGAAGAAGAAAAGCAAGTAGTAGTGGTGGAGGAAGGAGGAGGTAAGAGAGAAGAGGAGGTGGAAGAAAGGGTGGATAATGCGGCGAGGATTGCGGAGATTGTTGCTGATCTTTCGGGGTCGTGTGGTTTTAGCACTTCAAATGAGGAAGATGATACTTCAAGCACTACCACGGGTCCAAGGTCTAACAATATATCTCCCAATGGAAGAATCAAGTGTATTATTACCTCTGGCGATTGGCAAAAGGGTGAGCTTCTTGGACGTGGTTCCTTTGGCTCAGTCTATGAAGGAATTTCTGGAGATGGAGTCTTTTTTGCTGTGAAAGAGGTTTCACTGCTTGATCAAGATAATCAGGGAAAGCAAAGTATCTATCAACTGGAGCAGGAGATAGCACTTTTGAGTCAGTTTGAACATGAGAACATAGTTCAATACTATGGCACAGAAACGGATGAATCAAAGCTGTATATCTTTCTTGAGCTTGTAACCAAAGGTTCTCTTGCAAGCCTTTATCGCAGGTATACACTTCGAGATTCCCAAGTCTCTGCCTACACAAGACAGATTCTGCATGGCTTGAAGTATCTTCATGATCGAAATGTGCTTCACAGGGATATTAAATGTGCAAATATATTGGTGGATGCAAATGGATCTGTAAAGCTTGCTGATTTTGGATTGGCAAAGGCAACCAAATTGAATGACATTAAATCATGCAGGGGGACACCATTGTGGATGGCTCCTGAGGTTGTGAAAGGAAAGAACCAAGGTTATGGGCTTCCAGCTGATATGTGGAGTTTGGGATGCACTGTACTAGAAATGTTAACAGGCAAACTTCCATATTCGGAGTTTGAAAGTATGCAGGCATTATATAGAATTGGGAAAGGTGAGCGTCCTTCTATGCCTGATTCTCTTTCAAAGGATGCTCGAGACTTTATCCTGCAGTGCCTTCAAGTTAATCCAGATCACCGTCCCACTGCTGCCCAACTCTTGAGCCATCCATTTATCCAAAGACCAGTTTCCCACTCGTCGGGCTCATTTCCTAATCTTCCAGGCAAAAAAGGTTAA 1752 0.4834 MHHLPPFFNSSNRNQRSNNNSMDSKKLRRKPKLERRNAVKYVDYDADGSTTSSHDDSSSSVGGGSRSDSIYTRSMDFYDRTSFRIEGTEGEFDRICRSLGLSGPEDFAIPAAAWEAMKVRSSSDILPRLNPREERVPPRRSDVVAVGELAKEFEGGARVRVDETGGCCAESSSGICGGIKGVRPPMLRPPPGTKVPVVDNTSSTWDLLRDFAPEGSDNGHLLQIEPDKEDEEEEEKQVVVVEEGGGKREEEVEERVDNAARIAEIVADLSGSCGFSTSNEEDDTSSTTTGPRSNNISPNGRIKCIITSGDWQKGELLGRGSFGSVYEGISGDGVFFAVKEVSLLDQDNQGKQSIYQLEQEIALLSQFEHENIVQYYGTETDESKLYIFLELVTKGSLASLYRRYTLRDSQVSAYTRQILHGLKYLHDRNVLHRDIKCANILVDANGSVKLADFGLAKATKLNDIKSCRGTPLWMAPEVVKGKNQGYGLPADMWSLGCTVLEMLTGKLPYSEFESMQALYRIGKGERPSMPDSLSKDARDFILQCLQVNPDHRPTAAQLLSHPFIQRPVSHSSGSFPNLPGKKG* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0602 583 MobiDBLite consensus disorder prediction 1 67 - -
Ahy8g0602 583 MobiDBLite consensus disorder prediction 273 299 - -
Ahy8g0602 583 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 78 577 - -
Ahy8g0602 583 MobiDBLite consensus disorder prediction 46 67 - -
Ahy8g0602 583 MobiDBLite consensus disorder prediction 7 21 - -
Ahy8g0602 583 Pfam Protein kinase domain 312 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g0602 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 430 442 IPR008271 GO:0004672|GO:0006468
Ahy8g0602 583 ProSiteProfiles Protein kinase domain profile. 311 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g0602 583 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 78 577 - -
Ahy8g0602 583 MobiDBLite consensus disorder prediction 239 253 - -
Ahy8g0602 583 SUPERFAMILY Protein kinase-like (PK-like) 309 567 IPR011009 -
Ahy8g0602 583 SMART serkin_6 311 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g0602 583 ProSitePatterns Protein kinases ATP-binding region signature. 317 339 IPR017441 GO:0005524
Ahy8g0602 583 Gene3D Transferase(Phosphotransferase) domain 1 308 575 - -
Ahy8g0602 583 MobiDBLite consensus disorder prediction 227 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0602 Ahy-Chr8 11784251 11790059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0602 13 568 MAP Kinase Kinase Kinase AT4G08500 47.308 3.37e-166 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Ahy8g0602 Pkinase 1.10E-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0602 K13414 - gmx:100819999 726.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2885 17 128304750 128310266 Ahy8g0602 8 11784251 11790059 hybridization
Ahy17g2885 17 128304750 128310266 Ahy8g0602 8 11784251 11790059 PCT
Ahy8g0602 8 11784251 11790059 Ahy17g2885 17 128304750 128310266 PCT