Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0575 ATGGAAATAGACATGCTTGACATTCATAACATTGAATTCTCCGGCTACAGTACCACCACCACTCCCTCTTCCGACGAAAACCCTGCCTACACCAACTGGACCCACTGGTCCCCCCTCGTCAATTGGGAAGCCATCGCCGCCCCTCATGACGACTTCCACCACCTCATCGACTCAATCATCGACCATCACCACGCCACCACCCCCCTCCACCTCACACCCGACCACGATGACGAAGACGACACAACCACCGCCAACACAGCCGACGATGAATCGCCACCACTTCCAACAACACCAACACCTACCATCGCCGGCGAAGACGAAACAAAAGGCCTGAGGCTAGTGCACCTCCTCATGGCCGCAGCAGAATCCCTCACTGGCGCCACCAAGAGCCGTGACCTGGCTCGAGTGATATTGCTTCGACTCAAAGAGTTGGTTCCTTTTAGCAGCACCAGCAGCAGCACAGGGGCAACCAACATGGAAAGACTCGCCGCGCATTTTACCCAGGCACTCCAAGGTTTGCTAGATGGCGCAGGGGGTGGGGGCGCGCACAATAATCACAGTAACAATAACAAACAATACAGTTACTGGTCCCACCAAACGGAAACTCTAACAGCATTCCAACTGCTTCAAGACATGTCCCCTTACGTCAAGTTCGCCCACTTCACCGCCAATCAGGCCATCCTTGAAGCCATCGCACACCACAGACGGGCCCACATCGTCGATTTCGACATCATGGAAGGTATCCAGTGGGCCTCACTCTTGCAGGCCCTGGCCTCTCATAACAAAACAGCCTCGCCTGGCCCACACCTCCGCATCACTGCATTGTCTAGAACCGGCTCAGGCCGGAGATCCATTGCCACCGTTCAGGAGACAGGCCGGAGGCTCACTGCCTTCGCCGCTTCCTTAGGGCAGCCTTTTTCCTTTCACCACTGCAGGATGGACCCCGACGAAACGTTTCGGCCCAACGGGCTGAAGCTCGTTCGCGGGGAGGCTTTGGTGTTCAATTGCATGCTCAACCTCCCGCATTTGCCTTACCGAGCACGCGATTCAGTTGCGTCGTTCTTGAACGGCGCGAAGGATTTGAGTCCCGTGCTGGTGACGATGGCAGAAGAGGACATTGGGCCCGTAGGAGTGGATGCTGGATTTGTGGGCCGATTCATGGACTCATTGCACCACTACTCGGCGTTTTATGATTCCCTTGAAGCCGGGTTCCCAATGGAAGGTCGGGCCCGGGCTTTGGTTGAACGGGTATTTCTTGGACCGAGAATAACAGCGTCGTTGGGGCGGATATACCGAACAAGTGAGGGGAAGGAAGAAAGAGGGTCGTGGAGGGAATGGTTGTGTGGTATGGGGTTCAAGGGAGTACCTTTGAGCTCAGCCAATCAGAGCCAAGCGAAACTACTAATAAATTTGTTCAAGGACGGTTACAAATTGGAACAGTTAGGTTCCAATCAGTTAGTGTTGAGTTGGGAATCACGCCGTTTGTTTTCTACATCTATTTGGTCTTCTTCTTCCTCCTACTCTCAGATTGAACCATTGTAG 1542 0.5402 MEIDMLDIHNIEFSGYSTTTTPSSDENPAYTNWTHWSPLVNWEAIAAPHDDFHHLIDSIIDHHHATTPLHLTPDHDDEDDTTTANTADDESPPLPTTPTPTIAGEDETKGLRLVHLLMAAAESLTGATKSRDLARVILLRLKELVPFSSTSSSTGATNMERLAAHFTQALQGLLDGAGGGGAHNNHSNNNKQYSYWSHQTETLTAFQLLQDMSPYVKFAHFTANQAILEAIAHHRRAHIVDFDIMEGIQWASLLQALASHNKTASPGPHLRITALSRTGSGRRSIATVQETGRRLTAFAASLGQPFSFHHCRMDPDETFRPNGLKLVRGEALVFNCMLNLPHLPYRARDSVASFLNGAKDLSPVLVTMAEEDIGPVGVDAGFVGRFMDSLHHYSAFYDSLEAGFPMEGRARALVERVFLGPRITASLGRIYRTSEGKEERGSWREWLCGMGFKGVPLSSANQSQAKLLINLFKDGYKLEQLGSNQLVLSWESRRLFSTSIWSSSSSYSQIEPL* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0575 513 MobiDBLite consensus disorder prediction 67 104 - -
Ahy8g0575 513 ProSiteProfiles GRAS family profile. 104 502 IPR005202 -
Ahy8g0575 513 PANTHER SCARECROW-LIKE PROTEIN 26 4 503 IPR030028 -
Ahy8g0575 513 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 503 IPR005202 -
Ahy8g0575 513 Pfam GRAS domain family 113 501 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0575 Ahy-Chr8 11277878 11279715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0575 142 505 GRAS Transcription Factor Family AT3G54220 36.364 5.51e-49 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy8g0575 GRAS 4.80E-95 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0575 - - aip:107608402 895.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2863 17 127867604 127869379 Ahy8g0575 8 11277878 11279715 hybridization