Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0482 ATGGGTTCACAGCTACATCTGCTGCATCCTATTCTTGTTCTTGTTTGGATTCTTTGTGGTGCAGCAGATGCAGTAACTCAACCGAACTCAAATTGCACAAAACGCTGTGGCCCCCTCGAAATTCCGTTCCCATTTGGCACCGACGAGAGCTGTTCCCTCGACAGCTCCTTCCTCATCTCTTGCAACCACACTTCAACCCCATACTTGACTCACAACAACTCAACCGTGCTGAGCATCTCGCTCGACGGCGAAATGCGCGTCTCAGCAGCAGTAGCTAGAGGCTGCTACGACGTCAACGGCACGCGAATCAACGAAACCAGTTACGATAAGATCTTCAACTTGACACACTTCAGCTTCTCATCGAGTAAAAACAAGCTCACAGTGGTTGGTTGCAACACAATTGGAGAAGTAGTAGGGTATAATGTTATAGAGAGAAGAAACTATGCCACTGGGTGCTTTTCAGTGTGCCTCAGTGTTAATGAAACAACTAGCGGGATCTGCACCGGCGCCGGTTGTTGCCAGAGCCCAATACCGGCGAGTGGCCTATCGGATATCGGTATTGGATCTTATAGTAGTGGTGCTGACAGCTACAACGCCGTTTTTGGCAACATCAACCCCTGCGGCTACGCGTTTGTGGCGGAGGATGGAGCCTACAATTTCTCCTCGGCAGACCTTGTCAACTTCCGCCACCAAAGTTTTCCCGTTGTAGTGGATTGGGCTGTGGGGAATCAGACTTGTGAAGAAGCTCAAAAGAACACTTCAAGCTATGCATGTAGGGCTGATAAAAGTGAATGTTACAATGCAACCAAGGGACTTGGTTATGTTTGCAAATGCTCCACTGGTTTTGGGGGAAATCCTTATCTCGTTGGTGGTTGCCAAGGCGTTAGTGTTGGTGTTATAGCACTACTTGTGACAAGCTTCTATGTGTATTGGAGAATGAAGGAAAAGAGGTTAAATAAACTTAAGGAACAGTTCTTTCAACAAAATGGTGGCTTCATCCTACTACAAAAGATTTCAAGACATAGAGGGTCAAAAGAAACAGCTAAACTCTTCACCGTGGAAGAATTAAAGACAGCCACCAACAACTTTGACGAAAGCAAGATCTTAGGCAAAGGGGGTCAAGGAACAGTTTATAGAGGATTACTATCAGACAATAGAACCGTAGCAATTAAAAGATCCAAAATCAGTGGCTCAACCCAAATTGAACAATTCATCAATGAAGTTGTGTTGCTTTCCCAAATCAACCATAGAAACGTGGTTAGACTCTTAGGTTGTTGCTTAGAGACAGAAGTTCCCTTACTTGTTTATGAGTTCATTCCTAATGGTACCATTTTTGAGCATCTTCATGGTCATAACATTAATAATCCACAATCTTTGAAGCTTTCTTGGAAAACAAGATTGAGAATAGCAATAGAAACTGCTGGGGCCTTAGCATACTTGCATTCTGCTATTTCTATACCAATCATACACAGAGACATCAAAACTACTAATATTCTACTTGATGCTAATCTCACGGCAAAGATTTCTGATTTTGGAGCTTCAAAGATTGTTCCTCTAGATCAAACTGAATTAACCACTTTGGTGCAGGGGACACTAGGGTATCTTGACCCTGAATACATGCACACTAGCCAGTTAACTGAGAAAAGTGATGTGTATAGTTTTGGAGTCGTCTTAGCAGAGCTGCTCACGGGAAAGAAGGCGCTCTCTTTCGCCGTGTCGCCGGAGGTTAGAAACCTTGCTATATACGTTGTTTCTTCAATGGAAGAAGGATGTTTAGTTCAGATTGTGGATGAACACATTATAAATGAGGCAAACGTTGAGGATCTTGTGGAATTTGCCAATGTTGCTAAAGAGTGTTTGAGAGTTAAGAGGGAAGAAAGGCCTAGCATGAAAGAAGTTGCAATGCAACTTGAGGGGCTTAGAGGAGTAGTTGGAGAGAAACACCGATTGGAAGAAACTAAAAGCTCGTTGAAAGCATCATCGTCTTCAATCTTGGATGTTGAAAGTTCTAAGTTTATTGATAGCTTAAGTCAGGTTCCTATGTCACTGGCTGGTGGAAGATGA 2064 0.4346 MGSQLHLLHPILVLVWILCGAADAVTQPNSNCTKRCGPLEIPFPFGTDESCSLDSSFLISCNHTSTPYLTHNNSTVLSISLDGEMRVSAAVARGCYDVNGTRINETSYDKIFNLTHFSFSSSKNKLTVVGCNTIGEVVGYNVIERRNYATGCFSVCLSVNETTSGICTGAGCCQSPIPASGLSDIGIGSYSSGADSYNAVFGNINPCGYAFVAEDGAYNFSSADLVNFRHQSFPVVVDWAVGNQTCEEAQKNTSSYACRADKSECYNATKGLGYVCKCSTGFGGNPYLVGGCQGVSVGVIALLVTSFYVYWRMKEKRLNKLKEQFFQQNGGFILLQKISRHRGSKETAKLFTVEELKTATNNFDESKILGKGGQGTVYRGLLSDNRTVAIKRSKISGSTQIEQFINEVVLLSQINHRNVVRLLGCCLETEVPLLVYEFIPNGTIFEHLHGHNINNPQSLKLSWKTRLRIAIETAGALAYLHSAISIPIIHRDIKTTNILLDANLTAKISDFGASKIVPLDQTELTTLVQGTLGYLDPEYMHTSQLTEKSDVYSFGVVLAELLTGKKALSFAVSPEVRNLAIYVVSSMEEGCLVQIVDEHIINEANVEDLVEFANVAKECLRVKREERPSMKEVAMQLEGLRGVVGEKHRLEETKSSLKASSSSILDVESSKFIDSLSQVPMSLAGGR* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0482 687 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 19 289 - -
Ahy8g0482 687 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 293 662 IPR045274 GO:0007166
Ahy8g0482 687 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 19 289 IPR045274 GO:0007166
Ahy8g0482 687 SUPERFAMILY Protein kinase-like (PK-like) 346 637 IPR011009 -
Ahy8g0482 687 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 293 662 - -
Ahy8g0482 687 CDD STKc_IRAK 369 640 - -
Ahy8g0482 687 SMART serkin_6 363 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g0482 687 Pfam Wall-associated receptor kinase galacturonan-binding 32 87 IPR025287 GO:0030247
Ahy8g0482 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
Ahy8g0482 687 Pfam Protein kinase domain 364 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g0482 687 Gene3D Transferase(Phosphotransferase) domain 1 439 662 - -
Ahy8g0482 687 ProSiteProfiles Protein kinase domain profile. 363 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g0482 687 Gene3D Phosphorylase Kinase; domain 1 337 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0482 Ahy-Chr8 9691345 9696103 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0482 27 652 Receptor kinase-like Gene Family AT1G21250 44.509 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Ahy8g0482 Pkinase 6.40E-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0482 - - ahf:112706010 1365.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2738 17 125569033 125573749 Ahy8g0482 8 9691345 9696103 hybridization
Ahy6g2405 6 108424635 108427676 Ahy8g0482 8 9691345 9696103 PCT
Ahy8g0482 8 9691345 9696103 Ahy6g2405 6 108424635 108427676 PCT