Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0461 ATGGAGGATTCTTCTAATAATAACAATACTTGTGAGGACACTAAGATTTGTCCTCGCGGTCACTGGCGACCCGCCGAGGATGAAAAGCTTCGCCAACTTGTTGAACAATATGGTGCTCAGAATTGGAATTCCATTGCTGAAAAACTTCAAGGAAGATCAGGGAAAAGTTGTAGATTAAGGTGGTTCAATCAGCTAGATCCAAGAATCAACAGGAGGCCGTTCACGGAGGGGGAGGAAGAGCGGTTACTGGCGGCGCACCGCATTCACGGCAACAAGTGGGCCCTGATAGCGAGGCTATTTCCGGGAAGAACAGATAACGCCGTCAAGAATCACTGGCACGTGATCATGGCAAGAAAGCAAAGAGAGCAATCCAAGATTTGTGGCAAAAGAACCTTCCAAGACATGATGATTTTCAATAATAACAACAACGATTCCAATTCTTCTTCTTCTTCCAGTAACATCATCAAGAGACCAGCAAGAGTAATCGGGTTAGAATATTCCAGATTCTTCGATTTTCGCAACCTCGATAGCAATAAAGCTTCTACTTCTTGGAATTTCGCATCTTCTGTTCCGCCAGTAACTGATTCTTTTAGAAAAGGAGGAGGAGGAGGAAAAGACTATTTCACCATCAACGGTTCCAATATTTATCTTCCAGAAGGTTCTAGAACCTCCGATAGATTCTATTGCAGAGTTTTCCCGGGTGCTTCTACTACTACTACTGCTACTACTGCACCATTTGGTTCCTCTAATGGATTCTCATCATCGCTCCAAAACTACAAGAGGATCGTTCCGAATCCCTTCGCCTTCAAGGGTAGTTCTACGGAGAAGGAGAAAGAAGAAGATCATGAACCTAAAAATGAAGTTCCTTTCATTGATTTTTTGGGCGTCGGTGTCTCTTCTTCCTAG 906 0.4371 MEDSSNNNNTCEDTKICPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFTEGEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKICGKRTFQDMMIFNNNNNDSNSSSSSSNIIKRPARVIGLEYSRFFDFRNLDSNKASTSWNFASSVPPVTDSFRKGGGGGKDYFTINGSNIYLPEGSRTSDRFYCRVFPGASTTTTATTAPFGSSNGFSSSLQNYKRIVPNPFAFKGSSTEKEKEEDHEPKNEVPFIDFLGVGVSSS* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0461 301 Gene3D - 19 70 - -
Ahy8g0461 301 SUPERFAMILY Homeodomain-like 18 112 IPR009057 -
Ahy8g0461 301 SMART sant 70 118 IPR001005 -
Ahy8g0461 301 SMART sant 18 67 IPR001005 -
Ahy8g0461 301 ProSiteProfiles Myb-like domain profile. 19 65 IPR001005 -
Ahy8g0461 301 Gene3D - 73 134 - -
Ahy8g0461 301 PANTHER MYB PROTEIN-RELATED 6 299 - -
Ahy8g0461 301 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
Ahy8g0461 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 65 IPR017930 -
Ahy8g0461 301 Pfam Myb-like DNA-binding domain 22 82 - -
Ahy8g0461 301 PANTHER TRANSCRIPTION FACTOR MYB56 6 299 - -
Ahy8g0461 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 120 IPR017930 -
Ahy8g0461 301 CDD SANT 22 63 IPR001005 -
Ahy8g0461 301 CDD SANT 73 113 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0461 Ahy-Chr8 9241547 9243106 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0461 16 126 MYB Transcription Factor Family AT1G17950 81.982 2.47e-66 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy8g0461 Myb_DNA-bind_6 1.90E-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0461 K09422 - gmx:100817328 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2709 17 124822127 124823293 Ahy8g0461 8 9241547 9243106 hybridization