Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0399 ATGAGAACAAGTGATGCAAAAAACTGTTCATCACTATGGTGCGGGAAACATAACATAAAGCACCCTTTCAGGCTTCAAAACAGTTCAGTTCACTGCGGTGACCACAGGTACACCCTCTCTTGCGAGGATCATCACCAACTTTTCCTGTATTGGAAATCAGCCAAGTTCAGTGTTCAATCAATTAACTACAACAACTACACTATCCGATTAGTGGATGCAAATTTTGCCTTACTAGATATGCATCATCATCATCATCATCATCACTACTATTCTAACTCTTCCCTCCTCCTTAATTATTCCTTGGCCTCCTACAATTTCAGTGATTCTGAAACTGAGCCGTATCAGTATTTGTTATACAAAGTGAATGGAGATAGGCTTATGGTCATGAAGCAGATGATATATGTGAGGTGCATTAACGACACTTTCTATGTGAATTTTGATGGCAAGTCTCTGTGGGAATTGGGACTGAGAGACTCGTGTTATGTAGAGTGGATGTATCCAACATCTTTGCCTCACGATGAAGAATGCAAAATCAAGAACATTTCATGTAGAGACAACCGCAACATGCTGCTCTATGGTTTTGAACTTTCTTGGGCAGTTAGTTCTTGCAATCGTTACTTTCGGGACCAAGTAGAGATCGATGATCATAACAACGTTTTATGTTATCCCGTTTTTGTGCCACTATTTGCAGAAAATATTTTCAAAACTAAACTTCAAATTTGTATGATTTATCCGACTATTGAAGATTTTCTTCAAAGTGACAATAGTATTATGCTTATTAGATATTCCTACAAGGATATCAAGAACATAACAGGCGTGTTCAAGACAAAACTGGGAAACGGAGGCTACGGTTCTGTCTTTCACGGAAAACTTCGAAGTGGCCGCTTTGTAGCCGTTAAGTTGTTGAATAAGGCTAAATCCAATGGCCAAGAATTCATCAATGAAGTTGCTACTATTGGTAGAATTCACCATGTCAACATAGTGCAACTTATTGGTTTCTGCGTAGAGGGATCAAAGCGTGCTCTCATATATGAGCTCATGGAAAATGGATCATTAGAAAAATACATATTTTCCCCTCAGAAGAATGATTCCTTAAGTTGTGAAAAGCTCTACACCATTTCCCTTGGAGTAGCACGTGGTATTGAATACTTGCATAATGGCTGTGACATGAAAATTCTGCACTTTGACATCAAGCCTCACAATATTCTTTTGGATGAAAACTTCAACCCAAAAGTCTCTGATTTTGGACTTGCAAGGCTGTCTCCCATTGATAAAAGCATTGTGTCTATGACTGCAGCAAGAGGAACCATAGGGTACATGGCTCCTGAGCTTTTCTACAGAAATGTTGGCGCAATCTCATACAAAGCCGATGTCTATAGCTTTGGAATGTTGTTAATGGAGATGGCTAGTAGAAGGAAGAATCTGAATGCACACACTGAAAATTCCAGCCAAATATATTTTCCCTTCTGGGTTTATGATGAATTGCAGGATGGAAGGGAAATAACAATAGAAAATGACACAGATGAAGAGATGAAGTTGGCAAAAAGAATGATGATTGTGGCACTGTGGTGTATACAAACAAAGCCTAATGATCGACCTTCAATGAAGAGAGTTGTGGAGATGCTAGAACAAGACGATGACTTAGAAATGCCTCCAAAACCATACTTCTACCCACTTGATGCACCCACAGAGGAGAATGTTGAAGATACTACAACTCATAACAGTTCAAAGTTATCCTGTGATGACGTCTGTTCAGTCAGTGATTCAAAGGAATAG 1776 0.3913 MRTSDAKNCSSLWCGKHNIKHPFRLQNSSVHCGDHRYTLSCEDHHQLFLYWKSAKFSVQSINYNNYTIRLVDANFALLDMHHHHHHHHYYSNSSLLLNYSLASYNFSDSETEPYQYLLYKVNGDRLMVMKQMIYVRCINDTFYVNFDGKSLWELGLRDSCYVEWMYPTSLPHDEECKIKNISCRDNRNMLLYGFELSWAVSSCNRYFRDQVEIDDHNNVLCYPVFVPLFAENIFKTKLQICMIYPTIEDFLQSDNSIMLIRYSYKDIKNITGVFKTKLGNGGYGSVFHGKLRSGRFVAVKLLNKAKSNGQEFINEVATIGRIHHVNIVQLIGFCVEGSKRALIYELMENGSLEKYIFSPQKNDSLSCEKLYTISLGVARGIEYLHNGCDMKILHFDIKPHNILLDENFNPKVSDFGLARLSPIDKSIVSMTAARGTIGYMAPELFYRNVGAISYKADVYSFGMLLMEMASRRKNLNAHTENSSQIYFPFWVYDELQDGREITIENDTDEEMKLAKRMMIVALWCIQTKPNDRPSMKRVVEMLEQDDDLEMPPKPYFYPLDAPTEENVEDTTTHNSSKLSCDDVCSVSDSKE* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0399 591 PANTHER RUST RESISTANCE KINASE LR10-RELATED 5 580 IPR045874 GO:0004672
Ahy8g0399 591 SUPERFAMILY Protein kinase-like (PK-like) 254 543 IPR011009 -
Ahy8g0399 591 ProSitePatterns Protein kinases ATP-binding region signature. 278 300 IPR017441 GO:0005524
Ahy8g0399 591 MobiDBLite consensus disorder prediction 548 591 - -
Ahy8g0399 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 392 404 IPR008271 GO:0004672|GO:0006468
Ahy8g0399 591 ProSiteProfiles Protein kinase domain profile. 272 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g0399 591 Gene3D Transferase(Phosphotransferase) domain 1 347 554 - -
Ahy8g0399 591 Pfam Protein kinase domain 275 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g0399 591 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 2.8 5 580 - -
Ahy8g0399 591 SMART serkin_6 272 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g0399 591 Pfam Wall-associated receptor kinase galacturonan-binding 9 72 IPR025287 GO:0030247
Ahy8g0399 591 Gene3D Phosphorylase Kinase; domain 1 249 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0399 Ahy-Chr8 8124764 8128505 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0399 258 570 Receptor kinase-like Gene Family AT5G38280 50.784 3.12e-105 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy8g0399 Pkinase 2.10E-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0399 - - ahf:112704953 1150.58