Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0398 ATGTTTTTTGCTATTCCTGACATAAGGTGGAATACCAATAAGGTGACAATTGATTCAGGCAAAAGAATGTGTTCATCTGGGTGGTGTGGGAGGCATGACATAAGGTATCCTTTCAGGCTGAATAATAGTACTCCAAGCCTCTGTGGTGATCACAGGTACACCCTCTCTTGCGAGAATGATAACCAACTCTTTCTCTATCTCAAATCAATCAAGTTCCAAGTGCAATCAATTAACTACAACAACTACACAATTCGACTAGTAGATGCTAATGTTGCTCTGCATAGTCATGATCTCTCTTACCCCCTTCCTTATTCTTTAACCCCCTCCAACTTCACCGGAGCCCAAGATGAACCATATCATGATTGGTTCTATAAACAGCATTTTTATGATGTTATTAGACTGTCAAAGCAGATGGTATATTTGATGAGGTGCCCACCATATGGAGTTGAATCTTCTTCTGCTGCTGCAACCTGCATGAATGGATCTTATGCGCTTGGGAACATATGGATATCACTTCGGATTCTAATGACCGGAATGAGTAAGCCTTGTCTTTCCCTTTGCGCCACGTGCTATGCTAAACTGAGTGACTTTTATGATTTCTCTACTCTTCTCATCTCCTTTACAGTTTTATTTGTTCTTGCCAAATTTGCACTTGGAGCTCCATGCATCATTATCTTCTGCATATATAAATGGAGACGAAGGCATTTATCCATATATGACAGTATTGAAGATTTTCTGCGAAGTGACAACAACATCATGCCAATTAGATACTCCTACAAAGAAATCAAGGACATAACTGAAAAGTTCAAGACTAAACTAGGAAATGGAGGCTATGGCTCTGTCTTCCAAGGAAAACTTCGAAGCGGTCGTCTAGCAGCTGTTAAGGTATTGAATGAGACCAAATCCAATGGCCAAGAATTCATCAATGAAGTTGCTACTATTGGAAGAATTCACCATGTTAATGTGGTGCAACTCATTGGATTTTGTGTGGAAGGATCAAAAAGTTGTTTGGTATATGAGTTAATGCAGAATGGCTCTTTAGAAAAATACATATTTTTACCTCAAGACAGTGCTTCCTTAAGTTGTGAAAAACTCTATACCATTTCCCTTGGAGTGGCACGTGGAATTGAATACTTGCATAATGGATGTGACATGAAAATTCTGCACTTTGACATCAAGCCTCACAACATTCTTTTGGATGAAAACTTCAATCCAAAAGTCTCTGACTTTGGACTTGCAAGGCTATCTCCCACTGATAAAAGCATTGTGTCTATGACTGCAGCAAGAGGAACCATAGGGTACATGGCTCCTGAGCTCTTCTACAGAAATGTTGGTGCAATCTCATACAAAGCTGATGTCTATAGCTTTGGGATGTTGTTAATGGAGATGGCTAGTAGAAGGAAGAATTTGAATGCACAGACTGAAAATTCTAGTCAGATATATTTTCCCTTTTGGGTTTATGATGAATTGCAGGATGGAAGGGAAATAACAATAGAAAATGACACAGATGAAGAGATGAAGTTGGCAAAGAAAATGATGATTGTGGCATTGTGGTGTATACAGACAAAGCCTAATGATCGACCTTCAATGAAGAGAGTTGTGGAGATGCTAGAAGAAGATGATGACTTAGAAATACCTCCAAAACCATACTTCTACCCACTTGATGCACCCACAGAAGACAATGTTGAACATACCACAACTCATAGCAGTTCATTGCTTTCCTCTGACATCTCTTCAGTCAGAGATTCAAAGGAATAG 1758 0.3931 MFFAIPDIRWNTNKVTIDSGKRMCSSGWCGRHDIRYPFRLNNSTPSLCGDHRYTLSCENDNQLFLYLKSIKFQVQSINYNNYTIRLVDANVALHSHDLSYPLPYSLTPSNFTGAQDEPYHDWFYKQHFYDVIRLSKQMVYLMRCPPYGVESSSAAATCMNGSYALGNIWISLRILMTGMSKPCLSLCATCYAKLSDFYDFSTLLISFTVLFVLAKFALGAPCIIIFCIYKWRRRHLSIYDSIEDFLRSDNNIMPIRYSYKEIKDITEKFKTKLGNGGYGSVFQGKLRSGRLAAVKVLNETKSNGQEFINEVATIGRIHHVNVVQLIGFCVEGSKSCLVYELMQNGSLEKYIFLPQDSASLSCEKLYTISLGVARGIEYLHNGCDMKILHFDIKPHNILLDENFNPKVSDFGLARLSPTDKSIVSMTAARGTIGYMAPELFYRNVGAISYKADVYSFGMLLMEMASRRKNLNAQTENSSQIYFPFWVYDELQDGREITIENDTDEEMKLAKKMMIVALWCIQTKPNDRPSMKRVVEMLEEDDDLEIPPKPYFYPLDAPTEDNVEHTTTHSSSLLSSDISSVRDSKE* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0398 585 MobiDBLite consensus disorder prediction 563 578 - -
Ahy8g0398 585 Pfam Wall-associated receptor kinase galacturonan-binding 24 88 IPR025287 GO:0030247
Ahy8g0398 585 PANTHER RUST RESISTANCE KINASE LR10-RELATED 206 563 IPR045874 GO:0004672
Ahy8g0398 585 PANTHER RUST RESISTANCE KINASE LR10-RELATED 22 141 IPR045874 GO:0004672
Ahy8g0398 585 MobiDBLite consensus disorder prediction 548 585 - -
Ahy8g0398 585 CDD STKc_IRAK 273 539 - -
Ahy8g0398 585 ProSiteProfiles Protein kinase domain profile. 267 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g0398 585 Gene3D Transferase(Phosphotransferase) domain 1 342 548 - -
Ahy8g0398 585 ProSitePatterns Protein kinases ATP-binding region signature. 273 295 IPR017441 GO:0005524
Ahy8g0398 585 Pfam Protein kinase domain 270 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g0398 585 SMART serkin_6 267 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g0398 585 Gene3D Phosphorylase Kinase; domain 1 246 341 - -
Ahy8g0398 585 SUPERFAMILY Protein kinase-like (PK-like) 248 538 IPR011009 -
Ahy8g0398 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 387 399 IPR008271 GO:0004672|GO:0006468
Ahy8g0398 585 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 206 563 - -
Ahy8g0398 585 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 22 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0398 Ahy-Chr8 8119541 8123328 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0398 256 570 Receptor kinase-like Gene Family AT5G38280 48.910 6.49e-103 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy8g0398 Pkinase 2.20E-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0398 - - aip:107605930 944.88