Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0397 ATGCCAATTAGATATTCCTACAGGGATATCAAGAACATAACAGGCGTGTTCAAGACAAAACTGGGAAACGGAGGCTACGGTTCTGTCTTTCACGGAAAACTTCGAAGTGGCCGCTTTGTAGCCGTTAAGTTGTTGAATAAGGCTAAATCCAATGGCCAAGAATTCATCAATGAAGTTGCTACTATTGGTAGAATTCACCATGTCAACATAGTGCAACTTATTGGTTTCTGCGTAGAGGGATCAAAGCGTGCTCTCATATATGAGCTCATGGAAAATGGATCATTAGAAAAATACATATTTTCCCCTCAGAAGAATGATTCCTTAAGTTGTGAAAAGCTCTACACCATTTCCCTTGGAGTAGCACGTGGTATTGAATACTTGCATAATGGCTGTGACATGAAAATTCTGCACTTTGACATCAAGCCTCACAATATTCTTTTGGATGAAAACTTCAACCCAAAAGTCTCTGATTTTGGACTTGCAAGGCTGTCTCCCATTGATAAAAGCATTGTGTCTATGACTGCAGCAAGAGGAACCATAGGGTACATGGCTCCTGAGCTTTTCTACAGAAATGTTGGCGCAATCTCATACAAAGCCGATGTCTATAGCTTTGGAATGTTGTTAATGGAGATGGCTAGTAGAAGGAAGAATCTGAATGCACACACTGAAAATTCCAGCCAAATATATTTTCCCTTCTGGGTTTATGATGAATTGCAGGATGGAAGGGAAATAACAATAGAAAATGACACAGATGAAGAGATGAAGTTGGCAAAAAGAATGATGATTGTGGCACTGTGGTGTATACAAACAAAGCCTAATGATCGACCTTCAATGAAGAGAGTTGTGGAGATGCTAGAACAAGACGATGACTTAGAAATGCCTCCAAAACCATACTTCTACCCACTTGATGCACCCACAGAGGAGAATGTTGAAGATACTACAACTCATAACAGTTCAAAGTTATCCTGTGATGACGTCTGTTCAGTCAGTGATTCAAAGGAATAG 1005 0.4 MPIRYSYRDIKNITGVFKTKLGNGGYGSVFHGKLRSGRFVAVKLLNKAKSNGQEFINEVATIGRIHHVNIVQLIGFCVEGSKRALIYELMENGSLEKYIFSPQKNDSLSCEKLYTISLGVARGIEYLHNGCDMKILHFDIKPHNILLDENFNPKVSDFGLARLSPIDKSIVSMTAARGTIGYMAPELFYRNVGAISYKADVYSFGMLLMEMASRRKNLNAHTENSSQIYFPFWVYDELQDGREITIENDTDEEMKLAKRMMIVALWCIQTKPNDRPSMKRVVEMLEQDDDLEMPPKPYFYPLDAPTEENVEDTTTHNSSKLSCDDVCSVSDSKE* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0397 334 Gene3D Phosphorylase Kinase; domain 1 1 89 - -
Ahy8g0397 334 ProSiteProfiles Protein kinase domain profile. 15 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g0397 334 Pfam Protein kinase domain 18 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g0397 334 PANTHER RUST RESISTANCE KINASE LR10-RELATED 3 298 IPR045874 GO:0004672
Ahy8g0397 334 SMART serkin_6 15 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g0397 334 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Ahy8g0397 334 ProSitePatterns Protein kinases ATP-binding region signature. 21 43 IPR017441 GO:0005524
Ahy8g0397 334 MobiDBLite consensus disorder prediction 291 334 - -
Ahy8g0397 334 Gene3D Transferase(Phosphotransferase) domain 1 90 297 - -
Ahy8g0397 334 SUPERFAMILY Protein kinase-like (PK-like) 6 286 IPR011009 -
Ahy8g0397 334 PIRSF TyrPK_CSF1-R 16 105 - -
Ahy8g0397 334 PIRSF TyrPK_CSF1-R 96 334 - -
Ahy8g0397 334 PANTHER INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1, PUTATIVE-RELATED 3 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0397 Ahy-Chr8 8115321 8116750 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0397 4 313 Receptor kinase-like Gene Family AT5G38280 50.633 6.46e-108 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy8g0397 Pkinase 4.10E-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0397 - - ahf:112704953 640.188