Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0390 ATGAAACCTGTCATGGTGGTGTGGGTGTGGGTGTTGGCCTTACTCCTATCTTGTGGAAACGGTTACAGCAGAGTAACGGATTCTGTTACGTGTTCCAGTCAGTGGTGCGGAACGCATAACATAAGCTATCCATTCACACTAACTAACACTCCACCTAACTGCGGTGATCCCACCTTCAACAACACGCTCTCTTGCGACAATCATAACCAACTCTTTCTTTACTTCAAATCACGAAAATTCTATGTTCAGTCTATTAATTACAACAACTCCACACTCCGATTAGTAGATTCCACCATTATTAACAACTCTTCTTATTTTCTGGCCTCCTATAATTTCAACTCTTACAAATCATATCAACACCATCACAAGCAGATTCTATACGTGACGTGTCCAAACGCGGTGAGATCCGAAGTTGATGACCCTGCTGCAACTTGCATCAACGGTTCTTACGCGCCTGGAAGCAGCAGCTTCCATGTCTATGATGGTAACAAGACTTTGCAAGAGTTGGGACTGCAAGACACGTGTCGCGTAGAGTGGATGTATCCAAGTTCGTGGCCGGGTGAAATCGACGGTGGAAACATCTCTTGCGTAGATCTCCGTACAATGCTGCTTTACGGGTTTGAAATTCCCTGGGCCTTGTGTTTTTGCCAACATGCTGTCTTGGATGATCAAAATAACAACCTTCGTTGTTTAAGTCAACACTCACCCACTCCTTTAGTTGAAGTAATTGGAGACTGGATATACTATATAATATTTTTCTTGGTTGGCAAATTCATGCTTGGAATTGCATTCGTCATCTTCTGCGAATGGCGACAGAAGAATTTAGGCACGTATTACACCATTGAAGATTTTCTGCGAAATAACAATGAAATCTTGCCATTTAGATACTCTTATAAAGACATCAAGAACATAACCAAAGGATTCAAAACAAAACTGGGAAATGGAGGCTATGGCTCTGTCTTTCAAGGAAAACTTCCAAGTGGTCGTCTTGTAGCTGTCAAAGTTTTGAATAACACTAACACCAGATCTAATGAAGAAGAATTTATCAGTGAAGTTGCTACTATTGGTAGAATTTACCATGTCAATGTAGTGCAACTCATTGGTTTCTGTGTGGAAGGACTAACACGTGCTCTTATATATGAGTTAATGGAAAATGGGTCTCTAGAAAAGTACATATTTTCACATGAAAAAGGTGTTTTCTTAACTTGTGAAAAATTGTACAAAATTTCTCTTGGAGTGGCACGTGGCATCGAGTTCATGCATAATGGTTGTGACATGAAGATTCTGCATTTTGATATCAAGCCTCAAAACATTCTTCTTGATGAGAATTTCAATCCGAAAGTCTCTGATTTCGGACTTGCAAAGCTATGTCCCACTAGTGATAGCAAAGTGTCTTTGACTGCAGCAAGAGGAACTATAGGATACATGGCTCCTGAGCTTTTCTACAGAAACATTGGAACAATTTCCGATAAAGCTGATGTCTATAGTTTTGGAATGTTGTTAATGGAGATGGCAAGTAGGAAAAAGAATCTGAATACATCGGCTAAAAATTCTAGCCAACTTTATTTCCCTTTCTGGGTTTATAATCAGTTACATGATGGAAGTGAAATTGTAATTGAAAATGACACAGATGAGGAGATGAAGTTGGCCAAAAAGATGATGATTGTGGCATTATGGTGTATACAAACAAAGCCTAGTGATCGTCCTTCAATGAAGAGAGTTGTGGAGATGCTTGAACAAGATGATGAAGAATTGGAAATATCTCCTAAGCCTTACATATATTCACATGATATACCTGCACAAGATGTTGGAGATTTTAGCACTTCAATGCTATTCTCTGATGTATCATCAGTTAGTAATTCTAAAAAAATTGTGTATTCCCCTTAG 1887 0.3922 MKPVMVVWVWVLALLLSCGNGYSRVTDSVTCSSQWCGTHNISYPFTLTNTPPNCGDPTFNNTLSCDNHNQLFLYFKSRKFYVQSINYNNSTLRLVDSTIINNSSYFLASYNFNSYKSYQHHHKQILYVTCPNAVRSEVDDPAATCINGSYAPGSSSFHVYDGNKTLQELGLQDTCRVEWMYPSSWPGEIDGGNISCVDLRTMLLYGFEIPWALCFCQHAVLDDQNNNLRCLSQHSPTPLVEVIGDWIYYIIFFLVGKFMLGIAFVIFCEWRQKNLGTYYTIEDFLRNNNEILPFRYSYKDIKNITKGFKTKLGNGGYGSVFQGKLPSGRLVAVKVLNNTNTRSNEEEFISEVATIGRIYHVNVVQLIGFCVEGLTRALIYELMENGSLEKYIFSHEKGVFLTCEKLYKISLGVARGIEFMHNGCDMKILHFDIKPQNILLDENFNPKVSDFGLAKLCPTSDSKVSLTAARGTIGYMAPELFYRNIGTISDKADVYSFGMLLMEMASRKKNLNTSAKNSSQLYFPFWVYNQLHDGSEIVIENDTDEEMKLAKKMMIVALWCIQTKPSDRPSMKRVVEMLEQDDEELEISPKPYIYSHDIPAQDVGDFSTSMLFSDVSSVSNSKKIVYSP* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0390 628 SMART serkin_6 306 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g0390 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Ahy8g0390 628 ProSitePatterns Protein kinases ATP-binding region signature. 312 334 IPR017441 GO:0005524
Ahy8g0390 628 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 250 604 - -
Ahy8g0390 628 Pfam Wall-associated receptor kinase galacturonan-binding 31 96 IPR025287 GO:0030247
Ahy8g0390 628 ProSiteProfiles Protein kinase domain profile. 306 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g0390 628 SUPERFAMILY Protein kinase-like (PK-like) 289 579 IPR011009 -
Ahy8g0390 628 CDD STKc_IRAK 312 580 - -
Ahy8g0390 628 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 6 219 - -
Ahy8g0390 628 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Ahy8g0390 628 Gene3D Phosphorylase Kinase; domain 1 286 382 - -
Ahy8g0390 628 Pfam Protein kinase domain 309 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g0390 628 Gene3D Transferase(Phosphotransferase) domain 1 383 591 - -
Ahy8g0390 628 PANTHER RUST RESISTANCE KINASE LR10-RELATED 250 604 IPR045874 GO:0004672
Ahy8g0390 628 PANTHER RUST RESISTANCE KINASE LR10-RELATED 6 219 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0390 Ahy-Chr8 8073200 8075882 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0390 9 607 Receptor kinase-like Gene Family AT5G38260 36.480 7.66e-107 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy8g0390 Pkinase 2.30E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0390 - - aip:107605930 722.62