Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0383 ATGCACCCATTTGCATTAAGGGAGGTGCATCCTACGGCTGAAACGCCACCACCCAAGTGCAGGTGCACCGAAGACAACACCCCCAAAGTAATAATACCGAAAGAAGCTAAGGTTAACCCAAACCCCAAAACCCAATTAACTCCAAACATGAACTTTCCCATAATCCTCCTCCTTCTTTTCTTCTTCTCCTTGAAGCCTCCTCAAAAACACGTTATTGTGTCATCAACCACACAAGACACATGCTTGGATGCTGTTTGCAATCTAAGGGAGCCAGTAATTCGATTCCCTTTCCAAATAGAACCAAACTCATCATCATCATCATGTGGGTACCCAGGTTTCACAGTAACATGCAACAACCGTGGCCAAACACTCCTCAACCTACCTCATTCAGGAGGAGAGTTCAGCATCAAAGGGATAGACTACGACACTCAACAAGTGTGGGTAAACGACCCTGACAATTGCCTTCCAAAACGCATACTCTCTCTCAACCTCTCTTCATCCCCATTCGAAGCCGTTTACAACCAAGAATTCACGTTCTTCAACTGTTCCATGAACTTGGAGTATCTCAAGCATAGGTACAACCCCATAGCTTGTCTCAGTGATCCAAAGCACATGCTTTTTGCAACGTCTTCGTCAACCGTTGTTGTTTACTTGTCGTCGATTTGTAACGTGGTTAAGAGGGTGAAAGTGCCGGTTGGGGTGCCGTTTTACGAACATGTTGTGTCGTCTAACCTCAGCGATGATTTGAGGTTATCGTGGGAATGGCCAGAGTGTGGGAGGTGTGAGTCACACGGTGGAAGATGTGGCTTTGAGAGCAACACCACTTCGCATGTTGTGTGTTTCAACGATTTCCCTTCAAAAGGGTTTTCTCGTTGTGCACGATATGCAATAGCTATAGGCTTAGGAGTACCAGCATTATTGTGCTTCATTGGGATACTGAGTTGCCTGTGCAGCAAGCTCAAAATCTTAGCACACCGTTGGGTCTGGGACCGTCAAACTGTACCAGATTTCGAGCCCCTTATTAGCCCACAACCAACTATCATTTTGGGCCTAGATGGGCCAACTATTGAGTCGTACCCAAAAATGGTTGTGGGGGAGAGCCCAAATATTCTTCCGAAGCCCAATGACAACACATGCCCAATATGCTTGTCGGAGTACAAGCCCAAAGAGACAGTGAAAAGAATACCTGAATGTCTTCATTGCTTTCACGCTCAATGTATTGATGAGTGGCTTCCATTGAATGCTTCTTGCCCAATTTGCCGAACTTCTCCCAACAAGTTACCTGCAGCAGCTTAA 1296 0.4599 MHPFALREVHPTAETPPPKCRCTEDNTPKVIIPKEAKVNPNPKTQLTPNMNFPIILLLLFFFSLKPPQKHVIVSSTTQDTCLDAVCNLREPVIRFPFQIEPNSSSSSCGYPGFTVTCNNRGQTLLNLPHSGGEFSIKGIDYDTQQVWVNDPDNCLPKRILSLNLSSSPFEAVYNQEFTFFNCSMNLEYLKHRYNPIACLSDPKHMLFATSSSTVVVYLSSICNVVKRVKVPVGVPFYEHVVSSNLSDDLRLSWEWPECGRCESHGGRCGFESNTTSHVVCFNDFPSKGFSRCARYAIAIGLGVPALLCFIGILSCLCSKLKILAHRWVWDRQTVPDFEPLISPQPTIILGLDGPTIESYPKMVVGESPNILPKPNDNTCPICLSEYKPKETVKRIPECLHCFHAQCIDEWLPLNASCPICRTSPNKLPAAA* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0383 431 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 57 429 - -
Ahy8g0383 431 Pfam Wall-associated receptor kinase galacturonan-binding 85 150 IPR025287 GO:0030247
Ahy8g0383 431 Pfam Ring finger domain 377 421 IPR001841 -
Ahy8g0383 431 SMART ring_2 379 420 IPR001841 -
Ahy8g0383 431 MobiDBLite consensus disorder prediction 1 20 - -
Ahy8g0383 431 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 350 426 IPR013083 -
Ahy8g0383 431 ProSiteProfiles Zinc finger RING-type profile. 379 421 IPR001841 -
Ahy8g0383 431 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 57 429 - -
Ahy8g0383 431 Pfam Wall-associated receptor kinase C-terminal 221 282 IPR032872 -
Ahy8g0383 431 SUPERFAMILY RING/U-box 374 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0383 Ahy-Chr8 8040138 8042716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0383 81 425 C3H Transcription Factor Family AT2G46495 35.632 3.77e-61 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0383 - - adu:107460528 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2607 17 122571900 122574392 Ahy8g0383 8 8040138 8042716 hybridization