Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0343 ATGGAGAGAATGGTTTCTTCAATTCAAGGCTTACTTTTCTCCATAATCAACTGTCTTCAATTTTTTCCCCTAACTTCTCGGTCTAAGTACGGACAGATGATTTTTCTATCACAATTTCATTTTTCTTTAATCTCTCTTTTGTTTTCTGGGAGATTTTGTCAGCTTACCATTTTCCGAGAAAGTTCTGGGAAGACACAGGTGGTCTTAAATATATTTGATACTGTCAAATTAACGAACGAGGTTGTGATTCAGAAGGAAAATTTCAACAAGTTCTCGAATCAGTTGGAGAAGATCTCTTCTATTTTGAAGTCTTTACCAATAGAGGATATAGAGAATCCTGAGAGCTTGAAAGATGCCTTGGATGTTCTCAACCAAGCTATTACGGTTGCTAAGCAGCTGGTTTTTGAGGGGCACGGTAGAAGTAAGATTTATGTTTTGATGAATTCGAGAAGGATGGTTGCACGTTTGAAATGCTGCGGAGAAGAAATAAGGCGAGCCCTGAGGCTGATTCCTCTTGCAAGCAAAGATATAAGCGAGATGTTAGATGTGGAGTATGAAGATGAAGACGAACAAGTTTTGGAAAAAGTTGAGGGTGCGATACAAGAGAGGAATTTGGATGGAACGTATGCGAATGAGTTGTTGTGTTGTATTGCAGATGCCATGGGTGTCCCGAAGGAGAGTGATGCGTTGAAGAGAGAATTCCAAGAGTTGAAACGCGAAATGGAAAGTGCACGGTCCAGGAAAGATGTGGCAGAAGCTCTTCGCATGGAGAAGCTTATTGCAGTGCTTGAAAGGGCTGATTTGATAACCTCAGTGCAAGAGAAAGAAATTAGGTACTTTGAAAAGCGAAATTCTTTAGGCAGGACCCCTTTAGAGCCTCTGCATTCATTTTACTGTCCAATCTCTGGAGATATTATGCTGGACCCTGTTGAAACTTCTTCTCGCAAGACATTCGAGAGAAGTGCAATACAAAGGTGGTTCTCCCAAGGGAACACTCTCTGTCCATTGACCATGTTGCCCCTCGACACTCGAATCTTAAGGCCCAATAAGACTCTTCGCCACTCTATTCAAGAGTGGAAGGACAGGAATACAATCATCACCATTTCTACCATCAAGTCCCTGCTTGAAACAAATGAACAAGAGCAAGTGCTTGAATCCTTAGACAAGCTGCAGGATCTATGCTTAGAGAGACAGATACACCTAGAGTGGTTGAAAATGGAGAATTTCATAGCTCTTCTTATTGGACTTCTTGGTTCTAGAAACCGTGAAATAAGGAAGCGTGTTCTGCTCATACTGTCTTTGCTTGCAAAGGATGACACAGACAACAAGCAAGGCATTGCAAAAGTGGATGGTGCACTTCGATCGATTGTTCACTCACTTGCGCGTCAAATTGAGGAAAGCAAACTAGCATTGAAGTTGCTTTTGGAGTTATCCAAAACTAACATCTTGCTTCAACTCATAGGAAACGTTCAAGGAGGCATACTTCTAATAGTGACAATGTTAAATAGTGATGACGTTGAAGCAGCCAAAATTGCACATGAGCTTCTGGAGAACCTGTCTTTCCTTGACCAAAATGTTATAGAGATGGCAAAGGCAAATTATCTTAAGCCTTTGCTACTGAACCTTTCCACAGGAGCAAAGAATGTGAAAATACTCATGGCCGAAACCGTGTCCGAAATTGAATTGACTGAGCAGAATAAATTGTCCTTAGTTAAAGATGGGGCAGTGAGACCTCTTCTTGGACTGCTCTTGGAAAATGATGTGGAAATCAAGAAAGTGGTTGTAAAGTGTTTACTTAAGCTGTCAAGCTTGCTGGAGAATGGCATGCTGATGATTAAGCAAGGTGTTACTCGACCGCTATTAGAGTTGCTATACTCTCACAGTTTACAGTCACCTGCTCTGCAGGAACTGATCGTTGCAACAATAATGCATCTTGCCATATCAACCACCCACCAACAAGCTGAAGAGGAACGTGTATTGTTGCTTGATTCGGAGGAACAAGTATATAAATTCTTCTCTCTGGTTTCTTTGACAGAACTTGATGTACAAAACATGATTCTCAAAGCCTTTCAGGCACTATGCCAGTCTCTCTCCGGCTTCACCATCAGAATGTGGTTGAGACAGATCTCGGCTGCTAAAGTATTGGTCCACTTGGTAGAGCTTAACACCCACGCAGTTCGGGTGAATGCCTTGAAGCTTTGTTATTGCTTGACAGAAGATGGTGACCACAGGAATATCTCATCACACATAACTGAAAGGTTCATTAAGGTTTTGATGAACATCATCCAAGCTTCTGATGACGCTGAAGAGATGGTTGCTGCTATCGGCATCATCTCTAGACTACCACAGGAGACACACATAACCGAGTGGCTTCTGGATTCTGGGGCACTTCAAACTATTTCGGCATGCCTTAAAGATCAGCATAAACATGCCTCACACAGAAAGCAAGTGACAGAGAATTCTGTCGAAGCCCTTGGTCGATTTACTGTGTCGGCAAATCCGGAGTGGCAGAAGAGAGTAGCTGAAGCAGGCATGATCCCGGTGTTGGTGCAATTGCTGGCTTCTGGAACACCTCTTTCAAAACAGAAGGCAGCTATTTCGATGAAGCAGCTTTCTGAAAGCTCATACTGCTTGAGCAAGCCGATAAAGAAGGCGAGCGTTTTGAAACGGTGCTTCACAGCACAGGAAACAGGGTGCCCAGCACATTTAGGTACATGTACGATAGAGTCTTCATTCTGCATGTTACAAGGGAAGGCCTTGGAACCCCTTGTGCGGATGCTCTCGGAACAAGACGTTGGAACATGCGAAGCATCTTTAGATGCTCTAATGACTTTGCTTGACGGCCAAACACATTATAGTGGAAGTAAGGTGCTGGTGGATGCAAACGCTGTTGCACCAATGATAAAGCTCTTGAGTGTTCCAGCTTCAAGGTTGCAGGAAAAAACTCTAACAGCATTAGGCCAAATCTTTCAACTTGATGAAGTGAGAAATAAGTATAAGGCTATGGCCACAATGCCCTTGGTGGACATAACTCAGAGCAAAGACAGCCGTTTGAAAAGTCTTGCAGCTAAAGGCCTTGCTCAATTAGGTCTACTTGATAAACAATCTTCTTATTTTTAG 3120 0.4272 MERMVSSIQGLLFSIINCLQFFPLTSRSKYGQMIFLSQFHFSLISLLFSGRFCQLTIFRESSGKTQVVLNIFDTVKLTNEVVIQKENFNKFSNQLEKISSILKSLPIEDIENPESLKDALDVLNQAITVAKQLVFEGHGRSKIYVLMNSRRMVARLKCCGEEIRRALRLIPLASKDISEMLDVEYEDEDEQVLEKVEGAIQERNLDGTYANELLCCIADAMGVPKESDALKREFQELKREMESARSRKDVAEALRMEKLIAVLERADLITSVQEKEIRYFEKRNSLGRTPLEPLHSFYCPISGDIMLDPVETSSRKTFERSAIQRWFSQGNTLCPLTMLPLDTRILRPNKTLRHSIQEWKDRNTIITISTIKSLLETNEQEQVLESLDKLQDLCLERQIHLEWLKMENFIALLIGLLGSRNREIRKRVLLILSLLAKDDTDNKQGIAKVDGALRSIVHSLARQIEESKLALKLLLELSKTNILLQLIGNVQGGILLIVTMLNSDDVEAAKIAHELLENLSFLDQNVIEMAKANYLKPLLLNLSTGAKNVKILMAETVSEIELTEQNKLSLVKDGAVRPLLGLLLENDVEIKKVVVKCLLKLSSLLENGMLMIKQGVTRPLLELLYSHSLQSPALQELIVATIMHLAISTTHQQAEEERVLLLDSEEQVYKFFSLVSLTELDVQNMILKAFQALCQSLSGFTIRMWLRQISAAKVLVHLVELNTHAVRVNALKLCYCLTEDGDHRNISSHITERFIKVLMNIIQASDDAEEMVAAIGIISRLPQETHITEWLLDSGALQTISACLKDQHKHASHRKQVTENSVEALGRFTVSANPEWQKRVAEAGMIPVLVQLLASGTPLSKQKAAISMKQLSESSYCLSKPIKKASVLKRCFTAQETGCPAHLGTCTIESSFCMLQGKALEPLVRMLSEQDVGTCEASLDALMTLLDGQTHYSGSKVLVDANAVAPMIKLLSVPASRLQEKTLTALGQIFQLDEVRNKYKAMATMPLVDITQSKDSRLKSLAAKGLAQLGLLDKQSSYF* 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0343 1039 CDD RING-Ubox_PUB 297 338 IPR045210 -
Ahy8g0343 1039 ProSiteProfiles U-box domain profile. 292 366 IPR003613 GO:0004842|GO:0016567
Ahy8g0343 1039 SMART arm_5 951 991 IPR000225 GO:0005515
Ahy8g0343 1039 SMART arm_5 604 647 IPR000225 GO:0005515
Ahy8g0343 1039 SMART arm_5 480 521 IPR000225 GO:0005515
Ahy8g0343 1039 SMART arm_5 563 603 IPR000225 GO:0005515
Ahy8g0343 1039 SMART arm_5 833 873 IPR000225 GO:0005515
Ahy8g0343 1039 SMART arm_5 784 830 IPR000225 GO:0005515
Ahy8g0343 1039 Gene3D - 466 896 IPR011989 -
Ahy8g0343 1039 SUPERFAMILY RING/U-box 282 365 - -
Ahy8g0343 1039 Gene3D - 369 465 IPR011989 -
Ahy8g0343 1039 SUPERFAMILY ARM repeat 912 1033 IPR016024 -
Ahy8g0343 1039 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 273 368 IPR013083 -
Ahy8g0343 1039 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 44-LIKE 57 1039 - -
Ahy8g0343 1039 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 57 1039 - -
Ahy8g0343 1039 SUPERFAMILY ARM repeat 536 948 IPR016024 -
Ahy8g0343 1039 Pfam U-box domain 297 363 IPR003613 GO:0004842|GO:0016567
Ahy8g0343 1039 SUPERFAMILY ARM repeat 368 521 IPR016024 -
Ahy8g0343 1039 Coils Coil 227 254 - -
Ahy8g0343 1039 Gene3D - 901 1037 IPR011989 -
Ahy8g0343 1039 SMART Ubox_2 296 359 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0343 Ahy-Chr8 7110393 7114525 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0343 295 1039 U-box Gene Family AT1G76390 26.092 2.59e-50 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0343 - - adu:107460521 1945.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2553 17 120980408 120984513 Ahy8g0343 8 7110393 7114525 hybridization