Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0255 ATGGAGGCGGAGGAATCCCGGTCCCAGTTACCGGGAGACGAAGCAACAGCGGTTGAGGTAACCGCTGAGCAACTGGTGGCGAGGGCCATAGCTCCCATCAAGAAGGAATTCCTTCGCCCACCACCTGTTCGCTCTTCCTCCGCAGACAACGAAGCCGCTGCCGCCGCCACCAATGATAATAAGAACCCTGCTCATCCTGGTTCGGGTCTTCTAAAGGACAAGAAGTCCAAGCGCCAGCTCAAGCGTGAACGCCGTCAGGAGCAAAAGTCGGCACGAAACCTCTGCCCGGAAGTTGCAAAGACCGGTGATGTTACTTCATGTCCTTATAAAGACAAATGCCGCTACAGCCATGATATTGAAGCCTTCAAGGCCCAGAAACCAGCTGATCTAGAAGGACAATGTCCTTTTGTTAAGTCTGGAGGGCCTTGCCCTTATGGGTTAGCATGTAGATTTTCAAGTACCCATGAAGATGGTGTTCTTTCTTCTACTGGCCATCTCAACGGTCTTAAGAACAGTTCTGAGGTTAATGGATTGAGCAAAGATGTTCAGAAGCTTCTGTGGAAAAATAAGATGAGGTTCTCCAAGGCTGATGCCAAACTCAAAAGTCTTGGCCTCTTGTGCCCCAAGTCAAAAATGAAGGACATGGAAAATAAAGATGGTGAAAATGGCGGTTCAAATAAGTGTAGCCTTTCGGATGACAATGGGTGTTGTGAAGTAGCCTCTGACTTGGGTCCTAAGTTGGAAGAAGCTATAAAGGATGATGATGCTGATGCAAAATATGAAACCGATGAACTTTGTCCACAGAAAAGAAGAAAAACTGGAGTAAATTGTGATCCTAGTGAGATAGAAAAAGGTGTGAATGTTACTGAAGAAATTGAAAGAGGCAGCATAAATACTGAACCAGAAGCAGGATGTGATACTTTAACCATAAAAACTGATCTAAGTCTGAAGTTACATCCACGTGAAAAGAAGCTTATTGATTTTAGGGACAAATTGTATCTTGCACCCTTGACCACAGTTGGAAATCTCCCTTTTAGGAGGGTTTGCAAAGTATTAGGAGCTGATGTAACATGTGGTGAGATGGCAATGTGCACAAATCTTTTGCAGGGTCAAGCTTCTGAATGGGCATTGCTGAGACGTCATTCATCTGAAGATTTATTTGGTGTACAAATCTGTGGTGCATATCCAGATACTGTGGCTCGCACTGTTGAACTAATAGAACAAGAATGTACAATAGATTTTATTGATATAAATATGGGTTGCCCTATTGACATTGTTGTGAATAAGGGTGCTGGATCAGCTCTTCTGACAAAACCAATGCGGATGAAAAATATTGTTGAAGTAGCTTCAAGCACAGTGGATAAACCAATAACTATCAAGGTACGGACTGCTTATTTTGAAGGAAAGAATCGCATTGATTCTCTCATTGCAGACATGGGCTCTTGGGGAGCTGGCGCAGTAACAATACATGGAAGGTCACGTCAACAGCGCTATAGCAAGCTTGCTGATTGGGATTACATATACCAGTGTGGAAGGAAGGCCCCTAAGACATTGCCAGTAGTGGGGAATGGGGATGTTTTTTCGTTTGTAGACTGGAATAACCACAGAACTGCATGTCCTGAACTTGCTACCTGCATGGTTGCTCGTGGTGCTCTGATTAAACCTTGGATATTTACTGAGATCAAGGAACAGAGACATTGGGACATCAGTTCTGGTGAGCGACTAAATATTCTCAAAGAGTTTGTGCATTTTGGCCTTGAACACTGGGGATCTGACACAAAAGGAGTGGAGACGACGAGGCGGTTCTTGTTGGAATGGCTTAGCTACACTTGTAGGTACGTACCTGTTGGTCTTCTGGAAGTGATTCCACAACGAATAAACTGGCGTCCACCTTCTTACTATGGGCGAGATGAGCTTGAGACGCTGATGGCCTCAGACTCAGCAGCTGATTGGATACGCATATCAGAGATGCTACTAGGCAAGGTTCCGGATGGCTTTACATTTGCTCCAAAGCATAAATCAAATGCTTACGATAGAGCCGAAAATGGCTGA 2052 0.4469 MEAEESRSQLPGDEATAVEVTAEQLVARAIAPIKKEFLRPPPVRSSSADNEAAAAATNDNKNPAHPGSGLLKDKKSKRQLKRERRQEQKSARNLCPEVAKTGDVTSCPYKDKCRYSHDIEAFKAQKPADLEGQCPFVKSGGPCPYGLACRFSSTHEDGVLSSTGHLNGLKNSSEVNGLSKDVQKLLWKNKMRFSKADAKLKSLGLLCPKSKMKDMENKDGENGGSNKCSLSDDNGCCEVASDLGPKLEEAIKDDDADAKYETDELCPQKRRKTGVNCDPSEIEKGVNVTEEIERGSINTEPEAGCDTLTIKTDLSLKLHPREKKLIDFRDKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTVARTVELIEQECTIDFIDINMGCPIDIVVNKGAGSALLTKPMRMKNIVEVASSTVDKPITIKVRTAYFEGKNRIDSLIADMGSWGAGAVTIHGRSRQQRYSKLADWDYIYQCGRKAPKTLPVVGNGDVFSFVDWNNHRTACPELATCMVARGALIKPWIFTEIKEQRHWDISSGERLNILKEFVHFGLEHWGSDTKGVETTRRFLLEWLSYTCRYVPVGLLEVIPQRINWRPPSYYGRDELETLMASDSAADWIRISEMLLGKVPDGFTFAPKHKSNAYDRAENG* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0255 683 ProSitePatterns Uncharacterized protein family UPF0034 signature. 415 433 IPR018517 GO:0008033|GO:0017150|GO:0050660
Ahy8g0255 683 Gene3D - 84 163 - -
Ahy8g0255 683 Gene3D Aldolase class I 327 569 IPR013785 -
Ahy8g0255 683 Pfam Dihydrouridine synthase (Dus) 334 571 IPR035587 -
Ahy8g0255 683 MobiDBLite consensus disorder prediction 31 94 - -
Ahy8g0255 683 PANTHER TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE 25 683 - -
Ahy8g0255 683 ProSiteProfiles Zinc finger C3H1-type profile. 89 120 IPR000571 GO:0046872
Ahy8g0255 683 CDD DUS_like_FMN 331 566 IPR035587 -
Ahy8g0255 683 MobiDBLite consensus disorder prediction 50 64 - -
Ahy8g0255 683 PANTHER TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE 25 683 - -
Ahy8g0255 683 SUPERFAMILY FMN-linked oxidoreductases 331 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0255 Ahy-Chr8 5223220 5228843 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Ahy8g0255 Dus 1.20E-49 CL0036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0255 K05544 - gmx:100783494 1085.86