Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0252 ATGCAGCAAATGACAAGCCCAACTGTATCGAAGAATCGCAACGGCCTTCGTTCCATGTTACAAGTGAATTTGCAGCAGGCATATCATCATGACATGATGAAAAATAGTAATGATGAATCCTCTAACAGTAACAGCAGTCCCTACTACAAAGGCCTCACCGATCAATCCCTTGCCATCTTTGCACCCTCATCTCCACCTCATCATCATCATGATCATGCTACCATTCCTTGCTACCCTATTACTCCTCTTCCTCTCCCCAGCCTTCATCCTCACCTCTCATCATCCGGATCTGGGGCGCAGGGGCAAAGTCCGTACTACAAGGGTCTTACCGATTATTCCCTTGTTATTGGTTCTTGGAGCAGCCACAATCCTACTTCCACCAATCCATCATACCACCCTCAGTCTAGCCCTTACTACAGGGGCCTCACGGATTTCTCCCTTGTCCTTCACGATCATCCTCAGGAGACAGAGATTGATCCCAATGATGGTGAGGTTGAGGGCGACTTAGTACTGATCCAAGAAGATCATAAGACAGTATTAACAGAAGAGGTTAATGCCAAAGGGGTTCTATTAGTGGAGATGGAGGTTATTGATGCCACCCATGAAGAAGAGAAACCATTGAGGGAGAGAGTGACAGTAACACCGGATGATGATGATTTACAAGACACAAGGACGAAGGAGGATATTTATCATCATCATCAGGAAATAACATCACTACAAGAGGACCCAAATGCATACCAATATGAATGGGCAACCAAACACCAGCCCCAAACCTTGGAAGAATTCATCTGCAACTCTGATAAAGCACTCCAACTCCAAGCATTAGTAAGAGAGGGTTGTGGCTGTAATCATTTTATATTTGAGGGACCCCCCAACGTAGGAAAGAGATCCATGATCCGGGCTATGCTTCGCGAGCTATTCGGCCCTCAGAGACTGCAGGTCATAGAAGAATCCAGAGACTTCACCTTGAAGGGAGAAATGGTTGACAAGCTGCAAGTGCAGATAAAAAAATCACTGCATCATGTGGAGATCAATGTCTCAGAGACAAAGGGGTACGAAAAACACGTAATTGCGGATTTATTCAACGGAACATATGCCAAGACGATAAATAACTCCCTGCCTTGTAGCCCAGATAACTGCCAAGGTATACTCGTCTATATGTCTCTTTCAATCCCCTCAAAAATGTCTTCCAAAGTTCCTGAAACTTTATTGAAATGGATAAAGTCTTCAGTTCTTTGTTCCAATCCCATAGTTGATAGTGTCTTTGTAATGGAACTCCATAAACACCATAGGATTTGTAGTTCTAGCGAGGATGAGGCAAAATATGAAATAGTAGCTCCTAACCTTGAAGATCGAAGTGGCTCCTTCCCAACTCCATCCGAATTCTTGGGGATTTCTCAAAATTTATCAACTCGTTTTGATCCGAGGGGGATCCTTACTATTGGGGTATACTCCACCTTGTTGAAAGAGTTGGAGAGGACTCCCTTGAATGCTACTCAGTTTTTTTTGGAGGCCCTTCAGGCCGAGGTGGCCACTCTTCGGGAGGCTGAGAAGGGTTTGGAGGAGGAGAAGATAAGTCTGGAAGCCGAGCATTTTAAATTTCATGATCGAGAAAGACAGTCTTTGGCTTCCTGTGCTTTGGTCGAAGGGTTATTGAAGAAAGCTGAGGAGAATTATGTCTGA 1683 0.4456 MQQMTSPTVSKNRNGLRSMLQVNLQQAYHHDMMKNSNDESSNSNSSPYYKGLTDQSLAIFAPSSPPHHHHDHATIPCYPITPLPLPSLHPHLSSSGSGAQGQSPYYKGLTDYSLVIGSWSSHNPTSTNPSYHPQSSPYYRGLTDFSLVLHDHPQETEIDPNDGEVEGDLVLIQEDHKTVLTEEVNAKGVLLVEMEVIDATHEEEKPLRERVTVTPDDDDLQDTRTKEDIYHHHQEITSLQEDPNAYQYEWATKHQPQTLEEFICNSDKALQLQALVREGCGCNHFIFEGPPNVGKRSMIRAMLRELFGPQRLQVIEESRDFTLKGEMVDKLQVQIKKSLHHVEINVSETKGYEKHVIADLFNGTYAKTINNSLPCSPDNCQGILVYMSLSIPSKMSSKVPETLLKWIKSSVLCSNPIVDSVFVMELHKHHRICSSSEDEAKYEIVAPNLEDRSGSFPTPSEFLGISQNLSTRFDPRGILTIGVYSTLLKELERTPLNATQFFLEALQAEVATLREAEKGLEEEKISLEAEHFKFHDRERQSLASCALVEGLLKKAEENYV* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0252 560 Gene3D - 248 432 IPR027417 -
Ahy8g0252 560 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 247 359 IPR027417 -
Ahy8g0252 560 Coils Coil 503 530 - -
Ahy8g0252 560 PANTHER OS10G0574500 PROTEIN 40 370 - -
Ahy8g0252 560 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 40 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0252 Ahy-Chr8 5116721 5121555 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0252 250 362 Core DNA Replication Machinery Family AT5G27740 28.070 1.38e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0252 K10756 - aip:110268739 481.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3106 17 132691801 132692767 Ahy8g0252 8 5116721 5121555 hybridization