Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0242 ATGGAAACTGGGGATGACAATAGCAATGCCGATAGCCCTGAACGTACGGCAGGGATGGAGGGGTGCTTGTATTCCGAAGCTGTAAATAATGGAATGGTAATTGTTGATGGGAGTGGTCCTGATGAGAGCAAAGAAATTAGGCATTCGAAGAAGGAAGCTGTAAATACCAGAGTGTCAACTGCAGATGGGCGTTTTCGGACATACAAGAGGCGGAAACATGTAAAGATGAGTTGTTCAGAAAGCAAAGCTCAGGAAGAAAGCAGAGTGTGTGTGGAAGCCGCAAGTCACTTTTCAGAACAGGCTGTGAAGAAACCATATGGCAATGATAACAGTGGCACAAAGTGGTGCATAAAGGAAGCACTGATGAGTAATCCAAAATCCATTACCGACATGGAAACTTCTAAAATTGACAAAGATGGTCAAGAATGCTCGTCACACTTCGACTGTTCCTCTCATAGGTTACAGTTTGAAGCTAATGGGCATGCATATGTCATGCATGGTGGATGTTCAAGTGAATCAGATGGCAATGGTCTTACTAAGAAGTGTCAGCGTGTGTTCCATAATATCTTAGCCTCTGAAAAATTCAGTTCATTATGTAAGGTGCTACTAGAAAATTTTCATGGAATGAAACCTGAAAGTGTAGTTGACTTTAGTGTCATAAATTCAAGGATGACAGAAGAAGCTTATGAACAATCACCCACACTTTTCTTGTCAGATTTTCAACAGGTTTGGAGAAAGCTTGAAAACACTGGAAATGAGATTGTTGCTATAGCAAAGAGTCTTTCCAACTTGTCAAGAGCGTATTACTTAGAGCATGTGGGAGTTCCTGGACACAGTTCATTTGAGGATCAAAAACAAGTGTTCCATAACTATGCATTGGACAATGTTATGAGACCACAGCAGACAGAAGTTTGTGCTACAGATAAAGTCTGCAGTTGCAGGCATTGTGGAGGCAAGGCAGATGGGACAGACTCCTTGATTTGTGATTCATGTGAGGAGATGTACCATGTATCTTGTATCGTGCCGGCTTTGAAGGAATTACCTGAAAAAAGCTGGTTCTGTGCCAATTGTACTGCTATTGAAATAAGATCTCCACATGATAATTGTGTGGTGTGTGAAAGGTTGAATGCCCCAAAGTCCTTGAACAACATTGTTGGTGATGAGAGCATTCCTACAAATGATGAAACACACAATGAATTGGAGGAAAATTCAAATTGTACATATGGGATCGAGGTGTCCATAGGGAGAAGAAACTTGCCTGATTGCAAAATTTGTAGGGAGGAAGTAGATGGAGAAGATGTACGGATATGCGGTCACAATTCATGCCCTAGTAAATACTATCATGTAAGGTGTTTGTCCACTAAGCAGGTCCAGTCATATGCTCACTGTTGGTACTGCCCTTCTTGTTTATGTCGAGTTTGCCTCGTTGATCGAGATGATCACAAGATTGTTCTCTGTGATGGTTGCGACCATGGATACCACATCGATTGCATGGAGCCTAAACGGACTACCATTCCAAAAGGCAACTGGTTCTGCAGAAAATGCGATGCAGGGATCCAAGCAATACGCCGGGCTAAAAAGACATATGAGAATTTCAATTTTAGAACTGGCGAAGATGTTTCAAAGCCTAAGTATAAGCTTGGTAAGAAATGGAAACAAGGACGAGAATTGGAGAAAGATGGAGGAATGGACATGCTTTTAACAGCAGCCAACACACTTAAATTTGAAGAGAACTTGGCTAGTAGCTAG 1749 0.4174 METGDDNSNADSPERTAGMEGCLYSEAVNNGMVIVDGSGPDESKEIRHSKKEAVNTRVSTADGRFRTYKRRKHVKMSCSESKAQEESRVCVEAASHFSEQAVKKPYGNDNSGTKWCIKEALMSNPKSITDMETSKIDKDGQECSSHFDCSSHRLQFEANGHAYVMHGGCSSESDGNGLTKKCQRVFHNILASEKFSSLCKVLLENFHGMKPESVVDFSVINSRMTEEAYEQSPTLFLSDFQQVWRKLENTGNEIVAIAKSLSNLSRAYYLEHVGVPGHSSFEDQKQVFHNYALDNVMRPQQTEVCATDKVCSCRHCGGKADGTDSLICDSCEEMYHVSCIVPALKELPEKSWFCANCTAIEIRSPHDNCVVCERLNAPKSLNNIVGDESIPTNDETHNELEENSNCTYGIEVSIGRRNLPDCKICREEVDGEDVRICGHNSCPSKYYHVRCLSTKQVQSYAHCWYCPSCLCRVCLVDRDDHKIVLCDGCDHGYHIDCMEPKRTTIPKGNWFCRKCDAGIQAIRRAKKTYENFNFRTGEDVSKPKYKLGKKWKQGRELEKDGGMDMLLTAANTLKFEENLASS* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0242 582 Gene3D - 211 360 - -
Ahy8g0242 582 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 474 538 IPR013083 -
Ahy8g0242 582 SUPERFAMILY FYVE/PHD zinc finger 409 470 IPR011011 -
Ahy8g0242 582 ProSiteProfiles Zinc finger PHD-type profile. 468 518 IPR019787 -
Ahy8g0242 582 SUPERFAMILY FYVE/PHD zinc finger 301 359 IPR011011 -
Ahy8g0242 582 SMART PHD_3 471 516 IPR001965 -
Ahy8g0242 582 SMART PHD_3 421 470 IPR001965 -
Ahy8g0242 582 SMART PHD_3 312 358 IPR001965 -
Ahy8g0242 582 ProSiteProfiles Zinc finger RING-type profile. 422 469 IPR001841 -
Ahy8g0242 582 PANTHER D4, ISOFORM A 99 577 - -
Ahy8g0242 582 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 415 473 IPR013083 -
Ahy8g0242 582 PANTHER HISTONE ACETYLTRANSFERASE 99 577 - -
Ahy8g0242 582 ProSiteProfiles Zinc finger PHD-type profile. 310 360 IPR019787 -
Ahy8g0242 582 Pfam PHD-finger 471 516 IPR019787 -
Ahy8g0242 582 Pfam PHD-finger 313 358 IPR019787 -
Ahy8g0242 582 SUPERFAMILY FYVE/PHD zinc finger 470 524 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0242 Ahy-Chr8 4847598 4857771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0242 470 537 C2H2 Transcription Factor Family AT3G01460 39.706 1.23e-11 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Ahy8g0242 PHD 5.70E-12 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0242 - - lang:109337790 707.983