Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0224 ATGTCGGGATCGGAGATGGGAAGAAGAGAAGGCTTCACCGTTGGGCTTCACAGCCATAACAGCATGCGTTTGGACTTTTCTGATGGCCCTGCTCTCTACAGCAACAACAACAACAACCCTCTTGCGCCACCTTCTGCTTCTCCAACTTACCACCCTTCCACCGCAGTCACCGCTGCACCTATCAACATCAATGGCAGCGCGGTTGGCGGCATCGAATCGTTGGCGGCGCTGCCACAGGGCGGCCACATCGGGAGTAGCTCTGAGCCGAAGAAGAAGAGAGGGAGGCCAAGGAAATACGTACCGGATGGTGGCGGCGTAGGGTTAGGGTTGAATCCAGATTCTTCTGCTCCTGGTATGACCGTTAACCATAGCCAGAACCAGAATCCGAATCTGAATTCGAGCTTGAACCAGAATCAGTCCGGTGGCGGAGCTATGTCGCCGGCAATTGCTTCCGCCACACCTAATTCTAATTCCGGGAAGAAAAGGGGAAGGCCTCGTGGCTCTCTCAACAAGCATCCTCACTTAAAGGGTCTTGGATTGGCAAAACTTACTTTCACTCCGCATGTTCTTACTGTGAAATCTGGAGAGGATCTGGGAGTAAAGGTTACGTCCATCTCCATGGATGGTCCAAGAAATATTTGTATCTTAACAGCAAATGGAACCATATCTAATGTAACACTTAGCCAACCTTCGATACCTGGAGGAACTGTGACCTATGAGGGACGATTTGAGATCCTGGCACTCTGTGGTTCTTTTCTTCTTTCTGAAAATGGTCAGTTCCAAAGAACTGGTTCTTTAAGTCTGACCTTGTCTGGGCCTGATGGTCGGGTTATGGGTGGTGCAATCGCAGGTGTTTGTGTAGCTGCTTCCCCAATTCAGATAGTTTTCGCAAGCTTCCTTGTAGATGGTGGTTACAAGAAAATGAAGTCATCGAACCAGAACCAGAACCAGAACCAGAACCAGAACCAGAACCAGAACCAGAACCAGAACCAGATGGGGACCTTACCTTCCTCCCCTAATGTTCTCCCGGCTGGTCAAAGCAGCTCGCCATCGCATGGCACTCTTAGTGAATCTTCTGGTGGAGCCGGCAGCCCACTTAACCTGAGTACAGATGTTTGCAATAACAATAACACCCCACAAGGAATTTCCGGAATGCCCTGGAAATGA 1167 0.5004 MSGSEMGRREGFTVGLHSHNSMRLDFSDGPALYSNNNNNPLAPPSASPTYHPSTAVTAAPININGSAVGGIESLAALPQGGHIGSSSEPKKKRGRPRKYVPDGGGVGLGLNPDSSAPGMTVNHSQNQNPNLNSSLNQNQSGGGAMSPAIASATPNSNSGKKRGRPRGSLNKHPHLKGLGLAKLTFTPHVLTVKSGEDLGVKVTSISMDGPRNICILTANGTISNVTLSQPSIPGGTVTYEGRFEILALCGSFLLSENGQFQRTGSLSLTLSGPDGRVMGGAIAGVCVAASPIQIVFASFLVDGGYKKMKSSNQNQNQNQNQNQNQNQNQNQMGTLPSSPNVLPAGQSSSPSHGTLSESSGGAGSPLNLSTDVCNNNNTPQGISGMPWK* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0224 388 Gene3D - 187 319 - -
Ahy8g0224 388 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 10 71 361 - -
Ahy8g0224 388 MobiDBLite consensus disorder prediction 20 53 - -
Ahy8g0224 388 MobiDBLite consensus disorder prediction 30 53 - -
Ahy8g0224 388 MobiDBLite consensus disorder prediction 79 174 - -
Ahy8g0224 388 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 71 361 IPR039605 GO:0003680
Ahy8g0224 388 MobiDBLite consensus disorder prediction 115 163 - -
Ahy8g0224 388 Pfam Plants and Prokaryotes Conserved (PCC) domain 187 299 IPR005175 -
Ahy8g0224 388 ProSiteProfiles PPC domain profile profile. 181 321 IPR005175 -
Ahy8g0224 388 CDD DUF296 186 299 IPR005175 -
Ahy8g0224 388 SUPERFAMILY AF0104/ALDC/Ptd012-like 185 300 - -
Ahy8g0224 388 SMART AT_hook_2 159 171 IPR017956 GO:0003677
Ahy8g0224 388 SMART AT_hook_2 90 102 IPR017956 GO:0003677
Ahy8g0224 388 MobiDBLite consensus disorder prediction 308 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0224 Ahy-Chr8 4281814 4285441 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0224 28 388 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 43.514 4.61e-71 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0224 - - ahf:112705741 711.449