Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0222 ATGATGATGATGATGATGCTATCAATGGAAGAGCTAGCGTGTGAGCTGAGTGATCATGAAAAGAGAAACGCTCAAGGTTTGCCACCCGGTTTCAGGTTTCACCCAACTGATCAAGAACTCATTACCTTCTATTTGGCTTCCAAGGTCTTCAATACTACTACTACTACTCATGTCAACTTTGTGGAGGTTGATCTCAATCGATGCGAGCCATGGGAACTTCCAGAAGTGGCAAAGATGGGGGAGAGAGAGTGGTATCTGTACAGTGTGAGAGACAGAAAATACCCAACGGGCCTCAGAACTAACAGAGCAACCGCTGCTGGGTACTGGAAGGCTACCGGCAAGGACAAGCAAGTATACGGCGGCGGTGGCCTTGTTGGGATGAAGAAGACGTTGGTGTTCTACAAAGGGAGGGCCCCCCGCGGTCAGAAGACTAAATGGGTAATGCATGAGTTCCGGTTGGACCCTCACAGCTCTCCTTCCCTCTCTAAGGATGAGTGGGTAATATGCAGAATATTTCATAAAAGTGGGGAAAAGAGAACTCCTACTACTACTCCTGCTCCTCTGCTACTTCATCATCAACAACACGATCCATCATCACTGTTCAATGACCATATCTCCCACTCTCATAATCATAATCAAAACCTCCTCTCGCCATTGCTTCATCCTTTCCCAATCCCTGAAGAAACCACTAAAACCAAATCATCAACAATTAACAGCAACCATTACCCTCCACCACCACCTTCCTCCCAACACTTGCTTAAGCTCAATAAGTCTACTAAATTAACAAAAACAGTGCCTCCTTCTCCATCATTCTTCCAATACCAACAGCTTCTAGAAGATGATCCCAACTTATTGCATTGGATGGACAGTGGTAATAATAATAATAATAACTGCAAGGCCAATAATACTGCTAGTAGTGTTGAGATAATGGATGCTGCTGCTGCTGGCTTGATAGCATTCTCATCAGGAGGACCTTCACCTACTCCTACTAATAATAATAATAACAATTCTGAAATAATAAGGGACATGATGATGATGTCTTCTTCTTCGGCTTCTATGCTGCACATACTCGACGATGCTCCTCTTGGAATTCAATCTTGGCCTCATCATCATCATCATCACCTTCTGTAA 1131 0.4412 MMMMMMLSMEELACELSDHEKRNAQGLPPGFRFHPTDQELITFYLASKVFNTTTTTHVNFVEVDLNRCEPWELPEVAKMGEREWYLYSVRDRKYPTGLRTNRATAAGYWKATGKDKQVYGGGGLVGMKKTLVFYKGRAPRGQKTKWVMHEFRLDPHSSPSLSKDEWVICRIFHKSGEKRTPTTTPAPLLLHHQQHDPSSLFNDHISHSHNHNQNLLSPLLHPFPIPEETTKTKSSTINSNHYPPPPPSSQHLLKLNKSTKLTKTVPPSPSFFQYQQLLEDDPNLLHWMDSGNNNNNNCKANNTASSVEIMDAAAAGLIAFSSGGPSPTPTNNNNNNSEIIRDMMMMSSSSASMLHILDDAPLGIQSWPHHHHHHLL* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0222 376 Gene3D NAC domain 36 178 IPR036093 GO:0003677|GO:0006355
Ahy8g0222 376 PANTHER PROTEIN CUP-SHAPED COTYLEDON 3 17 302 - -
Ahy8g0222 376 MobiDBLite consensus disorder prediction 209 252 - -
Ahy8g0222 376 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 302 - -
Ahy8g0222 376 ProSiteProfiles NAC domain profile. 27 174 IPR003441 GO:0003677|GO:0006355
Ahy8g0222 376 Pfam No apical meristem (NAM) protein 28 153 IPR003441 GO:0003677|GO:0006355
Ahy8g0222 376 SUPERFAMILY NAC domain 22 174 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0222 Ahy-Chr8 4243861 4245440 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0222 5 179 NAC Transcription Factor Family AT1G76420 71.348 1.41e-89 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy8g0222 NAM 9.70E-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0222 - - aip:107607453 627.476