Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0196 ATGGTTAGTGCTGGTAGGTATGACGGAACAGTAGAGGCTAGACGGAAGGCTCTTGAATTGGCTCCTACGATTGGGATCCGTGATGGGTTGGTTAAGCAGATTGAGGACGAGGAAGCAGCAGTGCTAGAGACGATGCCATCGCCTGAGGAAATACGAGAGGCAGTTTGGGATTGCGAGTCCAGTAAAGCGCCAGGTAGTGACGGGTACAATACGAATTTCATAAAGAAATGTTGCGGTGAGATTGGCCAAGAGTTTACTACAGCTATATTGGATTTCTTTCAAAGTGCGAAGTTACCAACGGATGATAATGTAACATGGGTGACACTAGCTCCAAAATTTGTGAGAGCTAAGGAAATCAAAGACCTGAGGCCTATTAGCATGGTTGGTTGTGTCTACAAGGTACGAAAGAAGCAGGCGGCAATTATCAAATTGGACTTTCAGAAAGCGTACGACAGGGTGAGATGGAGTTTTGTGGATATTGTGCTGCAGAAGATGGGCTTTGGTCTTAGATGGAGGACATGGGTGAAGGAATGTGTGACTACAGCATCTATGTCGGTGTTGATCAACGGATCACTATTTAAGCCGTTCAGGATGGAAAGAGGTCTTAGACAAGGAGACCCTCTCTCTCCTTTTCTGTTTGTTCTTGTCGTAGATGTATTGCATAGGATGGTGGGTGAGGCAGTCAGGAATGGACGGATGACGAATATGTGTGATTTGTTGGGATGTACAGAAGCCACTCTACCTGTCAGCCTACCGGTGTACTACTCGAGCTTGTACAAGATGCCAAAGGCAGTTGCAGAAAAGATAATTGAGCTACAGAGAAGACATTACCGTCAAGAGGTGGCCCGTGGAAGGACATTTGCCAACTTAATATTAAAGAGTAACAGGTACTACAACAAGAGACTATATCAGAGGACATCACAAACTATAGTTTCACCAGTCCCATATAGAGAGGATTGGTTCCCCTCAAGAGTTAAACTAGCTTGGGCTGTTCCGAAGATTATCAAAGAGCTGTTTGAGAGCTGGATTGAAGTGCCTAGTCGTAAATCTGAGCAAAAGAAGTGGCTGATAGGGTTCTTTGCGACTGCTGCCGCCGTCCGTCGCACTCAAGAACTACCGTCTTCGTGGTCTCGGGCCTCTCGCCGGATCCTCCGCTTCGTGTGCTCGCATCTCCCCTCTCTCCTCTGTGCTCGGCTGCTCGCGCCTCACTCCGCCAGTGAGTGCTCGAGCTGTGCGCGTTGGTTGCTGCTCGTTGTCCGTGGTTGTCTCTGCTCGATTCTGCCTCCCAGTGTCACTCGAGTCTCGTCTCGGTCACTGGCATCTCGTGGTTCGTCTGTCTCGTCGCCGGCGGCAGAAGCAACTCGTGGGGTTGTCTCTTGCTTCGTCGCCTTCTGTGGGGTGGTTGCCGACTCGCCTTCAACCGTTGCTTCATGGTTTCAGGCACCGGATAAGGCTCCATTGAAAGATGGTTCAAGCATCAATCAGCTTCTTGGTATTAAAGGAGCTGCTCAAGATTCAAATAAATGGAAGATTCAAGTTCAATTTACAAAATTTGTCACTTGGCCTCCGTTGGTTTGGGGTGTAGTTTGTGGTGCCGCTGCTTCTGGAAATTTCCATTGGACTATTGAGGATGTTGCTAAATCAATTGCGGGCATGTTGATGTCTGGCCCGTTTCTAACAGGATATACTCGGACTATAAATGATTGGTATGACCGAGAAATCCGAATTCCTTCTGGGGTTATATCTGAGAACGAGGTTATCACTCAAATATGGGTGCTGCTACTAGGAGGTCTTGGCTTGGCAGGTCTATTAGACGTATGGGTTGTAAAGTGGCGATGTCCAAAGCAAAGCCTATCTCCCAACCCCGATCCCGGATTTGGTTGTCCAAAGAAAAGCCTAGCTCCCAATGCTGATGCCGGTTTTGGATTTCCAAAGAAAACCATACCTCCCAAGAAAAGCCTTCCTCCTAACCCTGATACTAGTTTCCAGAAAATGGTCCTTTATTTAGAGTCTATAGGTCTAGACTCTTTCTCAGTTATCGAAAATCATCCGAAGTTGATCACTGCCTCCCTCGATGACATTAAATCTACAGTGGAATACATTATGTCCATGGACTTCACCACGATCGAGTTTCGACGCATAGTTGGCATGTGCCCGGATGTTCTGACCACCCACGTCTCGGACATCATACCCGTCTTTACCTTCCTTCTCCGCGAGGCTCATGTAAAAGGCTCGGATATTAAAAGGGTCATACATCGTCGCCCGAGGTTGCTTGTTTGCAGTGTCAATAACCAACTCCGTCCTACACTTTACTACCTCCAAAGTATTGGCATAGAAGAGGTAAGTAGGCACACTGATTTGCTATCATGTAGTGTCCAAGAAAAGCTTATACCCCGAATAGATTACTTCGAGAATATCGGGTTTTCTCGACGCGATGCAACTACCATGTTCCGAAGATTTCCTCCACTGTTTTGTTACAGTATTAAGAATAATCTGGAGCCGAAATACAATTACTTTGTGGTGGAGATGGGGAGAGATTTGAAGGAGCTGAAGGAGTTTCCACAGTATTTCTCATTTAGCTTAGAGAACAGAATTAAGCCGAGGCATAAACGCTGCGTAGAAATGGGGGTGTGTTTCCCTCTCCCTGTGTTGTTAAAGATGACCGAAATGAGCTTTCAAAATAGGTTAGATCTATGTGTAAATTCCTCAACACCCTTGAAAAAATCTCCTCTCTGGTGTAATGCTTGTGATATTCAAGTATAG 2763 0.4651 MVSAGRYDGTVEARRKALELAPTIGIRDGLVKQIEDEEAAVLETMPSPEEIREAVWDCESSKAPGSDGYNTNFIKKCCGEIGQEFTTAILDFFQSAKLPTDDNVTWVTLAPKFVRAKEIKDLRPISMVGCVYKVRKKQAAIIKLDFQKAYDRVRWSFVDIVLQKMGFGLRWRTWVKECVTTASMSVLINGSLFKPFRMERGLRQGDPLSPFLFVLVVDVLHRMVGEAVRNGRMTNMCDLLGCTEATLPVSLPVYYSSLYKMPKAVAEKIIELQRRHYRQEVARGRTFANLILKSNRYYNKRLYQRTSQTIVSPVPYREDWFPSRVKLAWAVPKIIKELFESWIEVPSRKSEQKKWLIGFFATAAAVRRTQELPSSWSRASRRILRFVCSHLPSLLCARLLAPHSASECSSCARWLLLVVRGCLCSILPPSVTRVSSRSLASRGSSVSSPAAEATRGVVSCFVAFCGVVADSPSTVASWFQAPDKAPLKDGSSINQLLGIKGAAQDSNKWKIQVQFTKFVTWPPLVWGVVCGAAASGNFHWTIEDVAKSIAGMLMSGPFLTGYTRTINDWYDREIRIPSGVISENEVITQIWVLLLGGLGLAGLLDVWVVKWRCPKQSLSPNPDPGFGCPKKSLAPNADAGFGFPKKTIPPKKSLPPNPDTSFQKMVLYLESIGLDSFSVIENHPKLITASLDDIKSTVEYIMSMDFTTIEFRRIVGMCPDVLTTHVSDIIPVFTFLLREAHVKGSDIKRVIHRRPRLLVCSVNNQLRPTLYYLQSIGIEEVSRHTDLLSCSVQEKLIPRIDYFENIGFSRRDATTMFRRFPPLFCYSIKNNLEPKYNYFVVEMGRDLKELKEFPQYFSFSLENRIKPRHKRCVEMGVCFPLPVLLKMTEMSFQNRLDLCVNSSTPLKKSPLWCNACDIQV* 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0196 920 PANTHER CGI-12 PROTEIN-RELATED 662 906 IPR003690 GO:0003690|GO:0006355
Ahy8g0196 920 SMART mt_12 814 846 IPR003690 GO:0003690|GO:0006355
Ahy8g0196 920 SMART mt_12 748 779 IPR003690 GO:0003690|GO:0006355
Ahy8g0196 920 SMART mt_12 677 707 IPR003690 GO:0003690|GO:0006355
Ahy8g0196 920 SMART mt_12 712 743 IPR003690 GO:0003690|GO:0006355
Ahy8g0196 920 SMART mt_12 847 878 IPR003690 GO:0003690|GO:0006355
Ahy8g0196 920 SMART mt_12 780 809 IPR003690 GO:0003690|GO:0006355
Ahy8g0196 920 Gene3D Transcription termination factor 3, mitochondrial 729 899 IPR038538 -
Ahy8g0196 920 Pfam mTERF 737 893 IPR003690 GO:0003690|GO:0006355
Ahy8g0196 920 Pfam mTERF 663 739 IPR003690 GO:0003690|GO:0006355
Ahy8g0196 920 SUPERFAMILY DNA/RNA polymerases 50 226 IPR043502 -
Ahy8g0196 920 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 112 226 IPR000477 -
Ahy8g0196 920 PANTHER OS03G0360600 PROTEIN 662 906 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0196 Ahy-Chr8 3784961 3794043 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy8g0196 RVT_1 6.70E-18 CL0027
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0196 K15032 - ahf:112704905 1842.01