Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0123 ATGCCGTGGGTTGAAACCGCTCTTCCCCTTCAGCTTCGTGCCTGTCGCAGATTTCCGTTTTCACCCTCCCAGTTGACTCAAACATGTGCAATCAATAGTTTCAACTTCAATAATCATAATCACAATCACACAAGTAATCATCGTCAACTACCTCCTACTTTCTACAATCAAACTCAGCCTCCCATTAGGGCAGAGAATCAAACCACCAAGTCAAAACTTTCCAGATATACAAAACATGCCACTCACGAACCTAATGCTACTAAAGCTCCTCATTTGGCTGCAGTTAACAACTGTCGTTATGACAGTTCCTTAGGGTTGTTAACCAAGAAATTTGTCTGCTTGATTGAAGCGGCTGACTATGGTACCTTGGATTTAAATAAAACTGCTGAGACCTTGGAGGTTCAAAAACGAAGAATTTATGATATTACAAATGTTCTTGAAGGAATAGGATTGATAGAGAAGACTTCAAAGAATCATATACGGTGGAAGGGATGTAATGGACATGGACCCCAAGAACTGAATTATCAACTCAAAAGACTTAAGACTGAAGTTGAAAGTCTGTATGCTGAAGAATCTGCACTTGATGATTGTATAAGGCAAAAGCAAGAGCTAATAAAAAACTTGGAGGAAAATGAAAATTCTCAAAGGTACCTTTTCTTGACAAATGAAGATATTCTTAACCTTCCATGCTTCCAGAACCAAGAGCTTATTGCAATCAAGGCTCCGAAAGTTAGCGTTGTCGAGGTTCCCGATCCTGATCAGGAGTTAGGTTTCTGGCATTACAAAATGACTGTTAGAAGTGCAACTGGACCAATATATATATACCTATTGAGCAATAAAGGCCTTAAGTGTAAGGGTGATACTATCGAGCAGGTGAAGCTAATAGATCCATCATGGAATGGTAATCACTGCAAAATGAGGGACATGATATTATCAGAAAGCGAGGCTGATCTAAAAAATCCTTGTGAGGTTTTAACATCCCCAGGCTCAGAGGCATTTGGAATCCAAGAAATTACTCCTATGGAATTTAAAATGGATGATGACTATTGGTTTGAATCAGATGCTGGAGTGACCCTAACAGATTTGTGGGTTAACAATAACTTCTAA 1107 0.3921 MPWVETALPLQLRACRRFPFSPSQLTQTCAINSFNFNNHNHNHTSNHRQLPPTFYNQTQPPIRAENQTTKSKLSRYTKHATHEPNATKAPHLAAVNNCRYDSSLGLLTKKFVCLIEAADYGTLDLNKTAETLEVQKRRIYDITNVLEGIGLIEKTSKNHIRWKGCNGHGPQELNYQLKRLKTEVESLYAEESALDDCIRQKQELIKNLEENENSQRYLFLTNEDILNLPCFQNQELIAIKAPKVSVVEVPDPDQELGFWHYKMTVRSATGPIYIYLLSNKGLKCKGDTIEQVKLIDPSWNGNHCKMRDMILSESEADLKNPCEVLTSPGSEAFGIQEITPMEFKMDDDYWFESDAGVTLTDLWVNNNF* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0123 368 Pfam E2F/DP family winged-helix DNA-binding domain 101 164 IPR003316 GO:0005667|GO:0006355
Ahy8g0123 368 Gene3D - 94 166 IPR036388 -
Ahy8g0123 368 Coils Coil 194 214 - -
Ahy8g0123 368 PANTHER TRANSCRIPTION FACTOR E2F 24 365 IPR015633 GO:0000978|GO:0006357
Ahy8g0123 368 SUPERFAMILY "Winged helix" DNA-binding domain 99 162 IPR036390 -
Ahy8g0123 368 Gene3D - 171 280 - -
Ahy8g0123 368 SMART E2F_TDP_2 99 164 IPR003316 GO:0005667|GO:0006355
Ahy8g0123 368 Pfam E2F transcription factor CC-MB domain 180 277 IPR032198 GO:0046983
Ahy8g0123 368 PANTHER TRANSCRIPTION FACTOR E2FC 24 365 - -
Ahy8g0123 368 SUPERFAMILY E2F-DP heterodimerization region 176 279 IPR037241 -
Ahy8g0123 368 CDD E2F_DD 176 278 IPR032198 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0123 Ahy-Chr8 2315519 2320024 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0123 93 367 E2F-DP Transcription Factor Family AT1G47870 54.710 1.45e-89 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Ahy8g0123 E2F_CC-MB 5.20E-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0123 K06620 - gmx:100797301 398.282