Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0118 ATGGCTATGAGAAAATCAAGTGGCAGGCTTGCTTCTCAAACAACAATGATCAAGCAAATGGTGAAGAGATGCTCCAGTTTAGGAAGGAAACAACAGCAGCAAGGTGAAGACGTTCCAAAGGGTCACTTTGTTGTTTATGTTGGTGGAGTTGGAGAGAAGAGAAGCAGGTACATTCTTCCCATCTCCTTCCTCAGCACACCACAGTTTCAGATCCTCCTTCATCAGGCAGAAGAAGAGTTTGGATTTGATCATCAAATGGGTCTCACCATTCCTTGTCAACAACATGTTTTTGAGTCTCTTACTTCCATGCTCAGATGA 318 0.434 MAMRKSSGRLASQTTMIKQMVKRCSSLGRKQQQQGEDVPKGHFVVYVGGVGEKRSRYILPISFLSTPQFQILLHQAEEEFGFDHQMGLTIPCQQHVFESLTSMLR* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0118 105 PANTHER SMALL AUXIN-UP RNA-RELATED 8 105 - -
Ahy8g0118 105 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 8 105 IPR003676 GO:0009733
Ahy8g0118 105 Pfam Auxin responsive protein 18 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0118 Ahy-Chr8 2229956 2232712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0118 21 100 Calmodulin-binding Proteins AT3G43120 45.783 2.20e-18 73.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2288 17 110523479 110526472 Ahy8g0118 8 2229956 2232712 hybridization