Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0113 ATGGTGAAGGAGAAGCCAAGGTTGGCTTGGGCAGCAAATAGGGAAGCAAGGTCAACATGCCTTGATGGCCTTGACAACTATGACTATGGTGCTTATCAATGGACCGTCCAGCTTGTCACCAATGATAGCCGCTTGGAAAATATCCTCTTTCCTATCTTATGGGGCCTCATGACTCTCAGGTTCGATCAATGTTCAATCTCCCTACTATCATTAAAAGGAGTCAAGGACGCGGGATATGAGAAGATGACTATTGTACAGGCGGCAACTCTTCCTGTAAGGATGTCCTTGCCAAGGCTAGAACAGGCACTGGGAAAACAGTTGCCTTTTTGCTTCCATCAATTGAAGTTGTTGCAAATTCACCACCAACTGAACGTGATCATAGGCGGCCACCAATTTATGTGCTTGTCATATGTCCAACTCAAGAGCTTGCAAGTCAAGCGGCTACAGAAGCTGCTGAATTGCTTAAGTATCATCCTACCATTGGTGTTCAGGTTGTAA 498 0.4558 MVKEKPRLAWAANREARSTCLDGLDNYDYGAYQWTVQLVTNDSRLENILFPILWGLMTLRFDQCSISLLSLKGVKDAGYEKMTIVQAATLPVRMSLPRLEQALGKQLPFCFHQLKLLQIHHQLNVIIGGHQFMCLSYVQLKSLQVKRLQKLLNCLSIILPLVFRL* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0113 165 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 59 87 IPR014014 GO:0003724
Ahy8g0113 165 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 5 60 - -
Ahy8g0113 165 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 5 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0113 Ahy-Chr8 2129851 2131111 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0113 1 59 Ion Channels AT5G54250 69.492 2.41e-22 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0113 K05391 - ahf:114924390 325.479