Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0086 ATGGGAATGGAGGAGAGGAAACAGGCGAAGAAACCAGCACAAGCCAGCTCCAGAAAGGGTTGTATGAGAGGCAAAGGTGGCCCTGAGAATGCGAGCTGCACCTATAAGGGTGTTAGGCAGAGAACTTGGGGCAAATGGGTTGCTGAGATCCGTGAACCCAATCGTGGTGCTCGTCTCTGGCTTGGTACCTTTGAGACCTCTCATGAAGCTGCTCTTGCTTATGATACTGCTGCTCGTAAGCTCTATGGCCCTGATGCTAAGCTCAATCTCCCTCTTCATCACCATCACCATTCTTCTTCTAGTAATTCCCCCCAAATTCATCGCAACCACCCTCTTATTAATAATATTATTACTACTCCACCACCAGCAACACCACTTATTAGTTCTTCTTGTAATAATAGCGTCAACACAGCGTCGTCCATGGTGGCCTCTCTTCATCAGCAAGTTAGGCCACCAATATACCGCAGTGATTCTTCATCCATTGTGTCTTCTTCCCTTCCATTGGACAGCACCAACAATAAGGAGGAGGATGTTCTTCGACCGTTCTGGGGATCAGTGAATGATTGTTTGCCTGTGTTTGATGAATCAATCTGGACAGAAGCAGCCATGTCCCTTGATTTCCCTGTAATTGCTGCTGCAGAGGCTGCCACTGGAATTTACCCAAACGCCAACTTGGCAGATGTTGGTGTTTGGGACACCCCATGGTGCATGTAA 714 0.479 MGMEERKQAKKPAQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFETSHEAALAYDTAARKLYGPDAKLNLPLHHHHHSSSSNSPQIHRNHPLINNIITTPPPATPLISSSCNNSVNTASSMVASLHQQVRPPIYRSDSSSIVSSSLPLDSTNNKEEDVLRPFWGSVNDCLPVFDESIWTEAAMSLDFPVIAAAEAATGIYPNANLADVGVWDTPWCM* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0086 237 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2D 9 214 - -
Ahy8g0086 237 ProSiteProfiles AP2/ERF domain profile. 34 91 IPR001471 GO:0003700|GO:0006355
Ahy8g0086 237 PRINTS Ethylene responsive element binding protein signature 57 73 IPR001471 GO:0003700|GO:0006355
Ahy8g0086 237 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Ahy8g0086 237 Gene3D AP2/ERF domain 34 93 IPR036955 GO:0003700|GO:0006355
Ahy8g0086 237 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 9 214 - -
Ahy8g0086 237 SMART rav1_2 34 97 IPR001471 GO:0003700|GO:0006355
Ahy8g0086 237 MobiDBLite consensus disorder prediction 1 33 - -
Ahy8g0086 237 Pfam AP2 domain 34 83 IPR001471 GO:0003700|GO:0006355
Ahy8g0086 237 CDD AP2 33 86 IPR001471 GO:0003700|GO:0006355
Ahy8g0086 237 SUPERFAMILY DNA-binding domain 34 92 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0086 Ahy-Chr8 1474005 1474718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0086 8 210 AP2-EREBP Transcription Factor Family AT1G75490 48.529 7.90e-52 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy8g0086 AP2 2.70E-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0086 - - gmx:100797850 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2332 17 112602934 112604177 Ahy8g0086 8 1474005 1474718 hybridization
Ahy16g0102 16 1009161 1011665 Ahy8g0086 8 1474005 1474718 PCT
Ahy6g1242 6 18483539 18485883 Ahy8g0086 8 1474005 1474718 PCT
Ahy8g0086 8 1474005 1474718 Ahy16g0102 16 1009161 1011665 PCT
Ahy8g0086 8 1474005 1474718 Ahy6g1242 6 18483539 18485883 PCT