Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0072 ATGTTTCACTCTAAGCATCACTCTCTTACAAGAGCTCTTCTCTTCTTCCTCATCCACACTCCCCCTCTTCCATCTCCATCCATAAAATCTTACCTTCTTCTTCTGCCACAAACACGCCGCCACTCATCCCTCTTCTCAACCACCTCCACTTCCGGTGACCACCACTCTTTCACTGTCTCCTACCTCACCACCAAGTGCGGCTTCTCCCATGAAGACGCTCTCAGAGCAAACAGGCGCGTTCGCTTTGACACCCCGGTCAAGCCAGATTCCGTCATCTCCTTCTTCAAAGCCCACGGTTTCTCACTCTCCCAAATCACCACCATCATGCGCAGGATTCCCGTGTTCCTCACATGCGACCCCACCAATGCAATCTTGTCAAAGTTTCAATTTTTATCATCCAAAGGTGCTTCTCCCTCTGACATTGTACTCATGACCACAAGGAGTCCCCGCTTCCTGCTTCGAAGCCTTGACCATATAGTATCCTTGTACGAATTGGTAAGGAGGTTCTGTCCCTCTGATCTTAAGGCAATTGCTTATATAACTGCATGGCCATCATCCATTGCTGATGTTCGTCTGGCTCAAAATGTGAAATTGCTGCTTGATGAAGGGTTGACCAATGCCAACATTCACCATTTGCTTAGAACTAGGCCTTCTGTGCTGTCCTCTGCTGATTTGAAGAAAACAGTTGAGGAAGTGAAGCAATTGGGGTTTGATCCTTCACACTCTTATTTCAGTGTGGTGTTGCTGACCAAAAGGGCCATAACTAAGTCCAAATGGGAGGCTAAAGTTGATGTCCTTAAGAAATGGGGCTGGTCCGAACAAGATTTTTCGGAGGCCTTTAGGAGGCACCCCAATTTTATGCTACGTTCCGAGGACAAACTCAATGCAGTGATGAGCTTTTGGATCAGTAATCTCGGCTGGGATTCTTCGGCGCTTCGCATTAGACCGATGCTTTTTGGATGCAGTTTGGAGAAGAGGCTTATTCCTAGAGCTAAGGTTGTCAAATATCTTCTCTCCAATGGTTTGATGAAGAAGAATGCTAGCATAATCACACCATTTTCTTTGACTGAGGAGCTGTTCCTCAAGAAGTGTGTCACATGTTTTGAGGAGAAAGATCGGTCTCGCCTATTAACACTATATCAAGGAGGATGTTAG 1155 0.4641 MFHSKHHSLTRALLFFLIHTPPLPSPSIKSYLLLLPQTRRHSSLFSTTSTSGDHHSFTVSYLTTKCGFSHEDALRANRRVRFDTPVKPDSVISFFKAHGFSLSQITTIMRRIPVFLTCDPTNAILSKFQFLSSKGASPSDIVLMTTRSPRFLLRSLDHIVSLYELVRRFCPSDLKAIAYITAWPSSIADVRLAQNVKLLLDEGLTNANIHHLLRTRPSVLSSADLKKTVEEVKQLGFDPSHSYFSVVLLTKRAITKSKWEAKVDVLKKWGWSEQDFSEAFRRHPNFMLRSEDKLNAVMSFWISNLGWDSSALRIRPMLFGCSLEKRLIPRAKVVKYLLSNGLMKKNASIITPFSLTEELFLKKCVTCFEEKDRSRLLTLYQGGC* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0072 384 Pfam mTERF 92 238 IPR003690 GO:0003690|GO:0006355
Ahy8g0072 384 Pfam mTERF 192 360 IPR003690 GO:0003690|GO:0006355
Ahy8g0072 384 PANTHER CGI-12 PROTEIN-RELATED 36 382 IPR003690 GO:0003690|GO:0006355
Ahy8g0072 384 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Ahy8g0072 384 SMART mt_12 106 137 IPR003690 GO:0003690|GO:0006355
Ahy8g0072 384 SMART mt_12 210 238 IPR003690 GO:0003690|GO:0006355
Ahy8g0072 384 SMART mt_12 309 343 IPR003690 GO:0003690|GO:0006355
Ahy8g0072 384 Gene3D Transcription termination factor 3, mitochondrial 184 371 IPR038538 -
Ahy8g0072 384 Gene3D Transcription termination factor 3, mitochondrial 69 183 IPR038538 -
Ahy8g0072 384 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 36 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0072 Ahy-Chr8 1285104 1286664 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy8g0072 mTERF 7.20E-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0072 K15032 - gmx:102666739 330.102