Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0014 ATGAACAACAACAACAACTACTACAACAGAGCGAGGTACCCACCACCTGGGATCGGTGGCGGTGGTCTTGGACGAGGAGGAGGAGGAGGAGGCCCTGGTTTCAATCAAAACTCACCGTTTCAGCCAAGGCCTAATTACCAGCAACACCAGCAACAGCATCAACAACTACAACAGCAGCATCAGCAATATGTTCAGAGGCAGATGGTGCAGCAACAACAACAGCAGCAGCAGCAGCAACAACAGCAATGGCTGAGAAGGGCGCAGATGGGTGCTGCTGACTCCAACGTCGTGGATGAGGTTGAGAAGACCGTGCAGTCTGAAGCCATTGACCCGAGTTCTCAAGATTGGAAGGCAAGGCTAAAGGTTCCACCACCTGATACGCGTTATAAGACAGAGGATGTGACAGCAACTAAAGGAAATGAATTTGAGGATTATTTTTTGAAGCGAGAGCTGCTCATGGGAATATATGAGAAGGGTTTTGAAAGGCCTTCTCCTATCCAAGAAGAAAGCATTCCAATTGCTCTTACTGGTAGTGACATTCTTGCAAGGGCTAAAAATGGGACAGGCAAAACAGCTGCATTTTGCATTCCTGCATTGGAAAAAATTGACCAGGATAACAATGTTATTCAAGTTGTTATATTGGTTCCAACAAGGGAGTTAGCTTTGCAAACATCTCAAGTATGCAAAGAACTTGGAAAGCACTTGAAAATTCAAGTGATGGTTACAACTGGTGGTACTAGCCTGAAAGATGATATCATGCGCTTATATCAACCAGTTCATTTACTAGTTGGGACTCCTGGAAGGATATTGGATCTTGCTAAGAAGGGTGTTTGCGTTCTGAAAGATTGCGCAATGCTTGTTATGGATGAGGCTGATAAGCTTTTGTCCCCAGAATTCCAGCCTTCTATACAGCAGCTGATTCATTTTCTTCCTTCACACCGACAAATTCTGATGTTTTCAGCAACATTTCCTGTTACTGTAAAGGATTTCAAAGATAGGTATCTTCAAAAGCCATATGTCATTAACCTTATGGATGAGCTAACTTTGAAGGGTATCACACAGTATTATGCATTTGTCGAAGAGAGACAGAAGGTTCACTGCCTGAATACACTATTTTCTAAGTTGCAAATAAACCAGTCAATCATCTTTTGCAATTCGGTGAATCGTGTTGAACTCCTTGCAAAAAAAATCACCGAGCTTGGATATTCGTGTTTCTATATTCACGCAAAGATGTTGCAAGATCATCGTAATAGAGTGTTTCATGACTTCCGCAATGGCGCCTGCCGTAATCTTGTTTGTACTGATCTTTTTACTAGGGGAATAGACATTCAAGCAGTCAATGTTGTTATTAATTTTGATTTTCCCAAGAATTCAGAAACTTATCTCCACAGGGTCGGTCGCTCAGGGAGGTTTGGGCATCTTGGTTTAGCAGTTAACTTGATCACTTATGAGGATCGCTTTAATTTATATAGGATTGAACAAGAACTTGGAACTGAAATAAAGCAAATTCCACCACACATTGACCAGGCAATTTATTGCCGGTGA 1545 0.4227 MNNNNNYYNRARYPPPGIGGGGLGRGGGGGGPGFNQNSPFQPRPNYQQHQQQHQQLQQQHQQYVQRQMVQQQQQQQQQQQQQWLRRAQMGAADSNVVDEVEKTVQSEAIDPSSQDWKARLKVPPPDTRYKTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCAMLVMDEADKLLSPEFQPSIQQLIHFLPSHRQILMFSATFPVTVKDFKDRYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCR* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0014 514 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 287 295 IPR000629 -
Ahy8g0014 514 Gene3D - 111 344 IPR027417 -
Ahy8g0014 514 CDD DEADc_DDX6 142 342 - -
Ahy8g0014 514 SMART ultradead3 159 355 IPR014001 -
Ahy8g0014 514 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 171 341 IPR014001 -
Ahy8g0014 514 MobiDBLite consensus disorder prediction 94 131 - -
Ahy8g0014 514 SMART helicmild6 391 472 IPR001650 -
Ahy8g0014 514 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 140 168 IPR014014 GO:0003724
Ahy8g0014 514 MobiDBLite consensus disorder prediction 34 59 - -
Ahy8g0014 514 Pfam Helicase conserved C-terminal domain 366 472 IPR001650 -
Ahy8g0014 514 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 10 514 - -
Ahy8g0014 514 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 12 10 514 - -
Ahy8g0014 514 CDD SF2_C_DEAD 352 481 - -
Ahy8g0014 514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 210 494 IPR027417 -
Ahy8g0014 514 Gene3D - 345 514 IPR027417 -
Ahy8g0014 514 MobiDBLite consensus disorder prediction 1 59 - -
Ahy8g0014 514 Pfam DEAD/DEAH box helicase 165 329 IPR011545 GO:0003676|GO:0005524
Ahy8g0014 514 Coils Coil 46 66 - -
Ahy8g0014 514 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 351 511 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0014 Ahy-Chr8 149055 154616 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0014 140 511 Eukaryotic Initiation Factors Gene Family AT3G19760 37.968 2.68e-93 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0014 K12614 - fve:101307921 848.195