Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0006 ATGAGGCCTACAATGATGCTTAGGGCTCTCAACAAGCAGTTCATTGGATTGTTCTCGGACAAAAGCTTGACTAGTGCATCCAATGCTGCTGTGAAGAAGCCACTGCCGCTCGTGGCCTCTCGCAAACCAGCGTTCATTGATGCATTCCTTCACAAGATGAAAAACAACAAGACCCTTCTCATGAACAAGACCATTTGGTCTCGGAGATCCACCATCTTGCCCGAATTTGTGGATACCACTGTCAGAATCTACAATGGCAAAACCACCGTTCGCTGCAAGATCAATGAGGGAAAAGTTGGTCACAAATTCGGGGAGTTTGCACTCACCAGGAAGCGCAAGACCAGAGAACAACAATCCAATGCTAAGAATGTCAAGCCCAAGAAAAAGAAGTGA 393 0.4656 MRPTMMLRALNKQFIGLFSDKSLTSASNAAVKKPLPLVASRKPAFIDAFLHKMKNNKTLLMNKTIWSRRSTILPEFVDTTVRIYNGKTTVRCKINEGKVGHKFGEFALTRKRKTREQQSNAKNVKPKKKK* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0006 130 PANTHER 40S RIBOSOMAL PROTEIN S19, MITOCHONDRIAL 38 125 - -
Ahy8g0006 130 MobiDBLite consensus disorder prediction 108 130 - -
Ahy8g0006 130 PRINTS Ribosomal protein S19 family signature 85 97 IPR002222 GO:0003735|GO:0005840|GO:0006412
Ahy8g0006 130 PRINTS Ribosomal protein S19 family signature 97 112 IPR002222 GO:0003735|GO:0005840|GO:0006412
Ahy8g0006 130 PRINTS Ribosomal protein S19 family signature 65 84 IPR002222 GO:0003735|GO:0005840|GO:0006412
Ahy8g0006 130 MobiDBLite consensus disorder prediction 108 123 - -
Ahy8g0006 130 ProSitePatterns Ribosomal protein S19 signature. 85 109 IPR020934 GO:0003723
Ahy8g0006 130 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 38 125 IPR002222 GO:0003735|GO:0005840|GO:0006412
Ahy8g0006 130 SUPERFAMILY Ribosomal protein S19 41 114 IPR023575 GO:0003735|GO:0005840|GO:0006412
Ahy8g0006 130 Pfam Ribosomal protein S19 50 113 IPR002222 GO:0003735|GO:0005840|GO:0006412
Ahy8g0006 130 Hamap 30S ribosomal protein S19 [rpsS]. 6 123 IPR002222 GO:0003735|GO:0005840|GO:0006412
Ahy8g0006 130 Gene3D 30s Ribosomal Protein S19; Chain A 6 124 IPR023575 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0006 Ahy-Chr8 100380 102097 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0006 6 111 Cytoplasmic Ribosomal Protein Gene Family AT5G09490 25.472 8.93e-06 41.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0006 K02965 - gmx:100305608 169.859