LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy7g2308	ATGGCCCGCTCTACCTCGCGGGGTTCCAACTCCTCTCCCAATGGCCTCCTCACAGTTACCATCGCTGGCGGCCGCCATGACCACGTGGACCCCGCTTCGAACAACGAAGAAGAAGAAGACGATGAACTAGTGGATCCCGATGATCCTTTTGACGTTATCCACACCAAGAACGTCCCGCTCCAGACGCTCAAGCGTTGGAGACAAGCAGCATTGGTTCTGAATGCCTCCAGGCGTTTTAGATATACTTTGGACTTGAAAAAGGAAGAGGAGAAAGAGCAAAAGAAAAGCATGATTAGAGCCCATGCACAAGTCATAAGAGCAGCTTTGCTTTTCAGATTGGCTGGGGAACGGGAACTAGTGACAAATACAGCAGCGCCATCCCTGGCAGCCCCAACTCCTGATGGTGACTATGCAGTTGGACTCGAACAACTAGTTTCGATGTTTAAGGATCAGAACGTTCTTGCTTTGCAACACTATGGAGGGGTTAGGGGCTTAGCGGATATACTAAAATCAAATCCGGAGAAAGGCATTAGTGGAAGTGATATTGATCTATCAAAAAGGAAAATAGCATTTGGAACTAATACATATCCTCGGAAAAAGGGCAGAAGTTTCTGGAGGTTTCTTTGGGAATCTTGGCAAGATCTGACGCTTATAATATTGATTATAGCAGCTGTGGTATCATTGGCACTTGGAATAAAAACAGAGCAAAACCTATTGGAATGA	723	0.4633	MARSTSRGSNSSPNGLLTVTIAGGRHDHVDPASNNEEEEDDELVDPDDPFDVIHTKNVPLQTLKRWRQAALVLNASRRFRYTLDLKKEEEKEQKKSMIRAHAQVIRAALLFRLAGERELVTNTAAPSLAAPTPDGDYAVGLEQLVSMFKDQNVLALQHYGGVRGLADILKSNPEKGISGSDIDLSKRKIAFGTNTYPRKKGRSFWRFLWESWQDLTLIILIIAAVVSLALGIKTEQNLLE*	241

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy7g2308	240	Pfam	Ca2+-ATPase N terminal autoinhibitory domain	47	90	IPR024750	GO:0005516
	Ahy7g2308	240	PANTHER	-	45	235	IPR000528	GO:0006869\|GO:0008289
	Ahy7g2308	240	PANTHER	NON-SPECIFIC LIPID-TRANSFER PROTEIN	45	235	-	-
	Ahy7g2308	240	MobiDBLite	consensus disorder prediction	1	49	-	-
	Ahy7g2308	240	Gene3D	-	60	112	-	-
	Ahy7g2308	240	SUPERFAMILY	Calcium ATPase, transmembrane domain M	158	234	IPR023298	-
	Ahy7g2308	240	SMART	Cation_ATPase_N_a_2	156	232	IPR004014	-
	Ahy7g2308	240	MobiDBLite	consensus disorder prediction	1	18	-	-
	Ahy7g2308	240	Pfam	Cation transporter/ATPase, N-terminus	158	227	IPR004014	-

Showing 1 to 9 of 9 entries

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy7g2308	Ahy-Chr7	81096011	81106621	Dispersed/Proximal

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy7g2308	9	235	Primary Pumps ATPases	AT3G21180	60.435	4.11e-84	269

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy7g2308	K01537		-	ahf:112703833	430.254

Showing 1 to 1 of 1 entries