LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy7g2287	ATGCCTGCCGGTGGTGTTGGGCAAACCATATGTGTAACCGGCGCCGGAGGTTTCATCGCCTCTTGGATGGTCAAACTCCTCCTTGAAAGAGGTTACTCTGTCAAAGGAACCCTGCGTAACCCAGATGATCCGAAGAATGGACACTTGATGCAGTTGGAAGGAGCGGCGGAGAGGCTCACTCTTCACAAGGTCGATCTCCTTGACCTTGACTCTGTTAGGGCCGTCATTCACGGTTGCCATGGTGTCTTTCACACTGCTTCTCCCGTCACTGACAACCCCGAGGAAATGGTGGAGCCGGCGGTAAATGGAGCCAAGAATGTGATTATAGCAGCTGCGGAAGCTAAAGTGAGACGCGTGGTCTTCACTTCATCAATTGGCGCAGTGTATATGGACCCAGCGAGGAGCATGGACGAGGTGGTGGATGAATCGTGTTGGAGTGATCTAGAGTATTGCAAGAACACCAAGAACTGGTATTGCTATGGAAAGGCAGTGGCAGAAAAAGCAGCATGGGAAGAGGCAAAGGAGAAAGGGGTGGACTTGGTTGTGGTGAACCCAGTGTTGGTACTTGGACCGTTGCTGCAGCCAACCATAAATGCAAGTACAATTCACATCCTCAAGTACCTCACTGGCTCCGCCAAAACTTATGCCAATGCCACTCAGGCCTATGTCCATGTCAGGGATGTCGCATTAGCTCACATACTTGTCTACGAGACCCCTTCTGCTTCCGGTCGATACCTCTGCCTCGAAAGTTCCCTCCACCGCGGCGACCTCGTTCAAATTCTTGCCAAGCATTTCCCCGACTACCCTGTTCCCACCAAGTGTTCCGACGAAAAGAATCCAAGAGCAAAGCCCTACACCTTCTCTAACCAAAAGCTGAAGGATTTGGGATTAGAATTCACTCCAGTGAGTCAGTGTCTATATGAAACGGTTAAGAGCCTACAGGAGAAGGGCCACCTTCCTATTCCCAATAAGGAACAAGATTCTGTTCAAGTTAAAAAATAA	1002	0.501	MPAGGVGQTICVTGAGGFIASWMVKLLLERGYSVKGTLRNPDDPKNGHLMQLEGAAERLTLHKVDLLDLDSVRAVIHGCHGVFHTASPVTDNPEEMVEPAVNGAKNVIIAAAEAKVRRVVFTSSIGAVYMDPARSMDEVVDESCWSDLEYCKNTKNWYCYGKAVAEKAAWEEAKEKGVDLVVVNPVLVLGPLLQPTINASTIHILKYLTGSAKTYANATQAYVHVRDVALAHILVYETPSASGRYLCLESSLHRGDLVQILAKHFPDYPVPTKCSDEKNPRAKPYTFSNQKLKDLGLEFTPVSQCLYETVKSLQEKGHLPIPNKEQDSVQVKK*	334

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy7g2287	333	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	7	314	IPR036291	-
	Ahy7g2287	333	Gene3D	-	4	333	-	-
	Ahy7g2287	333	Pfam	NAD dependent epimerase/dehydratase family	10	241	IPR001509	-
	Ahy7g2287	333	PANTHER	NAD DEPENDENT EPIMERASE/DEHYDRATASE	5	323	-	-
	Ahy7g2287	333	CDD	FR_SDR_e	11	297	-	-
	Ahy7g2287	333	PANTHER	CINNAMOYL-COA REDUCTASE-LIKE PROTEIN	5	323	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy7g2287	Ahy-Chr7	80921591	80923973	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy7g2287	7	273	Monolignol Biosynthesis Gene Families	AT1G80820	73.408	1.19e-140	397

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy7g2287	K09753		-	gmx:100789070	582.022