Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g2239 ATGCCACTTCCACATTTGAACCTCATCACTACTTCTTCACTACTATCTCTCTCTCTCTCTCTCTCTGATATGGTGCAGTCAAAGAAATTCAGAGGTGTCAGGCAACGCCATTGGGGCTCTTGGGTTTCTGAGATTCGCCACCCATTATTGAAAAGGAGGGTGTGGCTTGGAACATTTGAAACTGCTGAAGAAGCAGCAAGAGCATACGATGAAGCAGCTATTTTGATGAGTGGAAGGAACGCCAAGACTAACTTCCCAGTTTCAGAGAACAATAACAATAACAACAACAGTTCCAGTGGCACTGCTTCTTCTTCATCTTCATCTTCCACAACAACATTCTCTGCAGTTCTTAGTGCAAAGCTGAGGAAGTGTTGCAAGTCGCCATCACCTTCTCTCACCTGCCTCAGGCTCGACACAGAGAATTGCCACATTGGTGTGTGGCAGAAGCGGGCCGGGCCTCGCTCCGAATCCAACTGGATCATGATGGTCGAGTTGGAAAGGAACAACACCACCACCCCCCTCACCACCCAACCTGCTTCTTCTTCCTTGAAGCCAGAGGAAGCCACCAATAATAACGGTGGCTTGGATGAGGAACAGAGGATTGCCCTGCAGATGATAGAAGAGCTTCTCAATAGGAATTAA 642 0.4782 MPLPHLNLITTSSLLSLSLSLSDMVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAILMSGRNAKTNFPVSENNNNNNNSSSGTASSSSSSSTTTFSAVLSAKLRKCCKSPSPSLTCLRLDTENCHIGVWQKRAGPRSESNWIMMVELERNNTTTPLTTQPASSSLKPEEATNNNGGLDEEQRIALQMIEELLNRN* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g2239 213 MobiDBLite consensus disorder prediction 85 109 - -
Ahy7g2239 213 Pfam AP2 domain 29 77 IPR001471 GO:0003700|GO:0006355
Ahy7g2239 213 Gene3D AP2/ERF domain 28 88 IPR036955 GO:0003700|GO:0006355
Ahy7g2239 213 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 24 213 - -
Ahy7g2239 213 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
Ahy7g2239 213 SUPERFAMILY DNA-binding domain 29 88 IPR016177 GO:0003677
Ahy7g2239 213 PANTHER AP2-EREBP TRANSCRIPTION FACTOR 24 213 - -
Ahy7g2239 213 CDD AP2 28 87 IPR001471 GO:0003700|GO:0006355
Ahy7g2239 213 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
Ahy7g2239 213 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
Ahy7g2239 213 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Ahy7g2239 213 MobiDBLite consensus disorder prediction 170 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g2239 Ahy-Chr7 80629794 80630729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g2239 24 213 AP2-EREBP Transcription Factor Family AT1G15360 63.682 7.65e-82 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy7g2239 AP2 9.60E-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g2239 - - gmx:100796962 261.536