Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g2162 ATGGGTAAGGGAACAGGGAGCTTTGGTAAGAGGAGGAACAAGACTCACACCCTCTGTGTGAGGTGCGGCCGCCGCAGCTTTCACCTCCAGAAGAGTCGCTGCTCCGCCTGCGCTTTCCCCGCTGCACGCAAGAGGAAATATAATTGGAGCGTGAAGGCCATCCGCAGAAAGACCACCGGCACCGGCAGGATGAGGTACCTCCGCCACGTGCCTCGCCGATTCAAGAGCGGCTTCAGAGAAGGTACTGAAGCTGCACCAAGGAAGAAGGGAGCAGCTGCATCTGCATAA 288 0.5799 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRKKGAAASA* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g2162 95 Pfam Ribosomal protein L37e 3 53 IPR001569 GO:0003735|GO:0005840|GO:0006412
Ahy7g2162 95 PANTHER RIBOSOMAL PROTEIN L37 1 95 - -
Ahy7g2162 95 SUPERFAMILY Zn-binding ribosomal proteins 1 55 IPR011332 GO:0006412
Ahy7g2162 95 PANTHER 60S RIBOSOMAL PROTEIN L37 1 95 - -
Ahy7g2162 95 Hamap 50S ribosomal protein L37e [rpl37e]. 2 53 IPR001569 GO:0003735|GO:0005840|GO:0006412
Ahy7g2162 95 Gene3D - 1 87 IPR011331 GO:0003735|GO:0005840|GO:0006412
Ahy7g2162 95 ProSitePatterns Ribosomal protein L37e signature. 4 23 IPR018267 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g2162 Ahy-Chr7 80053415 80054371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g2162 1 95 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 88.421 1.82e-58 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g2162 K02922 - csv:101221537 177.563