Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g2131 ATGGTTGCCGCCGGCGAACCCATGAAGAAGAAAGCGAAGCAAAACCTACTGAACCCCAATTGGGTTCAACTCCAACGAAAGCTAAAGCTCAATAATAAGTCTTCAAGGACCTACAAAGAAGAAGACACCCCAAAATCAATACTGGGGAAACGTAAAGAGAGCCCGAATGATGAATCCGATGACTCTCAGATTGATCCTCTTATTCCTGTAAATGACGACTCAAGTCTGACAGATGCAGTCGCCATAGATTGTGAAATGGTTGGCGTTGGTCAAGGAAACAAAAGTGCATTGGGAAGAGTAACAATGGTTAATAAGTGGGGAAATGTTCTTTATGACGAGTTTGTTCGGCCAGTAGAACGGGTTGTTGACTTCCGTACTAAAATTAGTGGCATAAGACCTCGAGATTTGAAAAAAGCAATTGACTTTTGGACTGCTCAGAAGAAAGTTGCAGAGTTGATGAAAGGAAGGATCCTTGTTGGTCATGCCTTGCAGAATGATCTTAAGGCGTTGTTATTAAGTCATCCGAAAAAGGACATTCGAGATACCTCCGAGTACCAGCCATTTCTAAAGTCAGGTTGTAGAAGAGCGCTGCGGCATCTTGCTGCAGAAATTCTTGGTGCCGAGATCCAATCAGGAGAGCACTGCCCTATACAAGATGCTCGTGCTGCTATGCTGCTTTACCAAAGAAATAGAAAAGAGTGGGAAAGGAGCTTAAGAGATCAGTTTAGGCTCAAAAAGAAGCAAAATAAACGGAAGAATAAAAAGAAACCAAAGAATGAAGATACTTCAAATGCCAACCATGCTATAATTGAATCATAG 819 0.4212 MVAAGEPMKKKAKQNLLNPNWVQLQRKLKLNNKSSRTYKEEDTPKSILGKRKESPNDESDDSQIDPLIPVNDDSSLTDAVAIDCEMVGVGQGNKSALGRVTMVNKWGNVLYDEFVRPVERVVDFRTKISGIRPRDLKKAIDFWTAQKKVAELMKGRILVGHALQNDLKALLLSHPKKDIRDTSEYQPFLKSGCRRALRHLAAEILGAEIQSGEHCPIQDARAAMLLYQRNRKEWERSLRDQFRLKKKQNKRKNKKKPKNEDTSNANHAIIES* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g2131 272 SUPERFAMILY Ribonuclease H-like 79 234 IPR012337 -
Ahy7g2131 272 SMART exoiiiendus 78 236 IPR013520 -
Ahy7g2131 272 MobiDBLite consensus disorder prediction 238 272 - -
Ahy7g2131 272 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 31 255 - -
Ahy7g2131 272 PANTHER RNA EXONUCLEASE 4 31 255 - -
Ahy7g2131 272 MobiDBLite consensus disorder prediction 1 20 - -
Ahy7g2131 272 MobiDBLite consensus disorder prediction 33 59 - -
Ahy7g2131 272 Gene3D - 75 255 IPR036397 GO:0003676
Ahy7g2131 272 MobiDBLite consensus disorder prediction 32 71 - -
Ahy7g2131 272 Coils Coil 217 237 - -
Ahy7g2131 272 Pfam Exonuclease 80 227 IPR013520 -
Ahy7g2131 272 CDD REX4_like 80 228 IPR037431 GO:0006364|GO:0008408
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g2131 Ahy-Chr7 79751807 79756069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g2131 79 237 C2H2 Transcription Factor Family AT5G40310 36.000 3.34e-28 108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1416 18 27117382 27121853 Ahy7g2131 7 79751807 79756069 hybridization