Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g2113 ATGATTCACAATGGAGTCTGTAACCTCCGCACCTGCCTCCGTCTCCCGGAGACCTCGCTTTCTCGATCACCACCGCTTTCCCTCGCTCTTCGCCGGCGATACCTTGCCGGCGCTTCCGCCGCCGCCAAGAAGGAGAAAGAGAAGGTGATAGTCATTTCCGGACCCACCGGTACTGGCAAGAGCCGCCTCGCTCTTGAGCTCGCCAAGCGCCTCAATGGGGAAATCGTCAGTGCCGACTCTATCCAGGTATATCGGGGTCTTGATATTGGATCTGCAAAGCCTTCCCAAAATGATAGAAAGGAGGTACCACATCATCTGGTTGACATACTGCATCCATCTGAAGACTATTCTGTTGGACAGTTTTTCGAGGATGCAAGGCAAGCTACAAGATCTATTCTTGACAAAGGACGTGTTCCCATAGTTGTCGGGGGCACTGGACTGTATTTAAGATGGTTCATATATGGAAAGCCAGATGTGCCTATAGCTTCTCCGGAGATTGCATCCAAAGTACATCTAGAGTTGGCTGAACTACAGAGAAAAGAAGAATGGGATGCAGCTGTGCAATTGGTGGTAAAAGCCGGTGATCCGAAGGCCCAACTTTTACCAGTGAATGATTGGTATCGCTTACGGCGTAGCCTGGAAATTATTAAGTCCAGTGGGTCACCTCCTTCTGCTTTTCGGGTACCATATGATTCTTTCAGGAAACAGGATGACTTTAGTGTTATTGATGGTTCTGAGTCATCTGAGGCAAACACAACAGAAGAAACCAATATGTCAGATTTGGACTACGAGTTTATGTGTTTTTTCCTTTCTGTCCAAAGACTTGACCTCTATAAATCACTTGATTATCGGTGTGAAGAAATGCTATTAGGAAGGGATGGGATTCTATCTGAGGCTCAGTGGCTTCTTAATTTGGGTCTTCTTCCAAATTCGAATTCTGCAACACGAGGAATTGGTTACAGACAAGCCATGGAGTACTTATTAAGTTGCAGAAAGCTAAATGGTCAGAGTTCAGTAGGAGAATTTTACAAGTTCTTATCTGAATTTCAAAAAGTATCACGGAATTTTGCGAAGAGACAGCTTACATGGTTTCGAAATGAAAAAATATATGACTGGCTTGATGCTTCTAAACCTCTGGAAACAGTACTCAACTTCATTGTTGATTCATACCAGAACAGGAATGGAAGGCTTGTTGTGCCCGAGAGTCTAAGAATGCCACGAGATATTTCTAATCACCGAGAAGCTAATTTAATTAAGTCCTACAGAACCAGAAATAGGCATTTTTTGAAGCGGGAAGATTGTTCTCATATTCTGGACTGGATAGGGGAGACCCAAAGTGGGATACAAAGACTGGAAAATCCAAGAGAGGCAAATTATGAGAGAGTCTGA 1389 0.4442 MIHNGVCNLRTCLRLPETSLSRSPPLSLALRRRYLAGASAAAKKEKEKVIVISGPTGTGKSRLALELAKRLNGEIVSADSIQVYRGLDIGSAKPSQNDRKEVPHHLVDILHPSEDYSVGQFFEDARQATRSILDKGRVPIVVGGTGLYLRWFIYGKPDVPIASPEIASKVHLELAELQRKEEWDAAVQLVVKAGDPKAQLLPVNDWYRLRRSLEIIKSSGSPPSAFRVPYDSFRKQDDFSVIDGSESSEANTTEETNMSDLDYEFMCFFLSVQRLDLYKSLDYRCEEMLLGRDGILSEAQWLLNLGLLPNSNSATRGIGYRQAMEYLLSCRKLNGQSSVGEFYKFLSEFQKVSRNFAKRQLTWFRNEKIYDWLDASKPLETVLNFIVDSYQNRNGRLVVPESLRMPRDISNHREANLIKSYRTRNRHFLKREDCSHILDWIGETQSGIQRLENPREANYERV* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g2113 462 Pfam IPP transferase 82 367 - -
Ahy7g2113 462 Gene3D - 46 434 IPR027417 -
Ahy7g2113 462 CDD NK 49 90 - -
Ahy7g2113 462 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 39 446 IPR039657 -
Ahy7g2113 462 TIGRFAM miaA: tRNA dimethylallyltransferase 49 226 IPR018022 GO:0008033
Ahy7g2113 462 Hamap tRNA dimethylallyltransferase [miaA]. 49 384 IPR018022 GO:0008033
Ahy7g2113 462 Gene3D - 158 228 - -
Ahy7g2113 462 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 9 39 446 - -
Ahy7g2113 462 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 208 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g2113 Ahy-Chr7 79313912 79320645 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g2113 52 369 C2H2 Transcription Factor Family AT2G27760 25.982 9.28e-19 86.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1450 18 28101976 28108998 Ahy7g2113 7 79313912 79320645 hybridization