Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g2077 ATGAATAATAGGTTCAACAACAAGAATCATCCAATAATAAAAGATCCATCATCATCATCATCATCAAGAAGCTATGCCAACGGTGAAGACTACATGATGATGAGTGGTTTTCCATGGCCACCAAGATCATACTCATGCAGCTTCTGTAGAAAAGAGTTCAAGTCAGCACAAGCACTTGGCGGACACATGAATGTTCATAGAAGAGATAGAGCAAGGTTGAGGCATCAATCACCACCTCCATTATCAACTAATCTTCATCATCAAGTTCCTAATCTCAACCTTAATCTTAACCCTATTATTATTACTACTACTACTACTACTACTAGTACCTCTAACCCTAACTTGTCATCATACAAAAAACCTTCCACTACTACATTGCCCTTGTTTCTTATGGATGGTGTTTTACTTAGCCCTTTGAGCACAAAACCCAACAACATTCTGGATCAAGTTGAAGGATATGATGGTAATTTCGCAAGAAGAGAAGATGAAGAAGGGTGCAAGATCTTGAAGAAAGGTGAGATTCTGAGAGTGGATTTGGAGATAGGGTTGCCTATTCCTTCTACTACTACTACTACTACTAAAAAAGTTGATTATGATTTGGATCTTGAGCTTCGTTTGGGTACTTGCTCTTAA 633 0.3807 MNNRFNNKNHPIIKDPSSSSSSRSYANGEDYMMMSGFPWPPRSYSCSFCRKEFKSAQALGGHMNVHRRDRARLRHQSPPPLSTNLHHQVPNLNLNLNPIIITTTTTTTSTSNPNLSSYKKPSTTTLPLFLMDGVLLSPLSTKPNNILDQVEGYDGNFARREDEEGCKILKKGEILRVDLEIGLPIPSTTTTTTKKVDYDLDLELRLGTCS* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g2077 210 MobiDBLite consensus disorder prediction 1 24 - -
Ahy7g2077 210 Gene3D Classic Zinc Finger 40 87 - -
Ahy7g2077 210 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN 5 146 - -
Ahy7g2077 210 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN 131 209 - -
Ahy7g2077 210 PANTHER OS07G0101800 PROTEIN 5 146 - -
Ahy7g2077 210 Pfam C2H2-type zinc finger 44 68 - -
Ahy7g2077 210 ProSiteProfiles Zinc finger C2H2 type domain profile. 44 71 IPR013087 -
Ahy7g2077 210 ProSitePatterns Zinc finger C2H2 type domain signature. 46 66 IPR013087 -
Ahy7g2077 210 SUPERFAMILY beta-beta-alpha zinc fingers 41 70 IPR036236 -
Ahy7g2077 210 PANTHER OS07G0101800 PROTEIN 131 209 - -
Ahy7g2077 210 SMART c2h2final6 44 66 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g2077 Ahy-Chr7 78542364 78543213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g2077 29 207 C2H2 Transcription Factor Family AT3G23130 36.765 5.84e-28 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy7g2077 zf-C2H2_6 3.00E-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g2077 - - aip:107610839 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1492 18 30316895 30317754 Ahy7g2077 7 78542364 78543213 hybridization