Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g2060 ATGGCGAATCAATTGCTTGAAGTGCTTGTTGCTCATAATAACAAATCCAATAATCATCACTATCTAAATAGATCATATGATGATGATAAAGGGTTAATGGTACTATTACCATATGCTGAAGATCTTGTGCATCAAGTACTAAGATCATTCACGAATTCCCTTTTGATCTTGAACACTACTACTACCACTAAAAGTGATGCTATTGATCATGATGTTTTCTCCGATGGAAGGGTGGTTTTTGATTCTACAAAATTCAGAGATTTCTCTTCTACTACTTCTTCTCCGAGTCTTCATCACACAAACAATAATCGATTAAGAAAGAATTATTATAGGTGCAGTCACAAGAATGATCAAGGTTGCCCAGCAACAAAAAAAGTGCAACAAATTCAAGACAATCCACCATTGTTCCGAACAAGCTATTATGGTCATCACATATGCAAAAGCATCACTTATAATGAGGAAACAATTTTGGAATCTGAATCTTTTTCCGAATCTTCTATGTTCCTTAGCTTCAATAATAATAATAATAATAACAATAATAGCAATGTTATTATTACACCTAGCAAAGAACACCAATTTTCATCATCACAAGCTTTTGAATCAAAAAACTTCATCTCACAAAACCAATTATTACTATCTTCATCAGATTACTACCACCCATTATGTGTCTATGAAGAACTTGGTTTCGACTATTCTAGGCATCATGATCCTATGCTATATTCCACTGATGAAAAGGTTCAATTTGACAATAATGCTTTAGGGTGGGACTTATTGGATTATGATGGCTTGGCATGTTATGGTCAACAAATTTAA 813 0.3333 MANQLLEVLVAHNNKSNNHHYLNRSYDDDKGLMVLLPYAEDLVHQVLRSFTNSLLILNTTTTTKSDAIDHDVFSDGRVVFDSTKFRDFSSTTSSPSLHHTNNNRLRKNYYRCSHKNDQGCPATKKVQQIQDNPPLFRTSYYGHHICKSITYNEETILESESFSESSMFLSFNNNNNNNNNSNVIITPSKEHQFSSSQAFESKNFISQNQLLLSSSDYYHPLCVYEELGFDYSRHHDPMLYSTDEKVQFDNNALGWDLLDYDGLACYGQQI* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g2060 270 Pfam WRKY DNA -binding domain 100 147 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy7g2060 270 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 100 250 IPR044810 GO:0003700
Ahy7g2060 270 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 98 IPR044810 GO:0003700
Ahy7g2060 270 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 100 250 - -
Ahy7g2060 270 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 98 - -
Ahy7g2060 270 SUPERFAMILY WRKY DNA-binding domain 100 147 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy7g2060 270 SMART WRKY_cls 99 148 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy7g2060 270 ProSiteProfiles WRKY domain profile. 107 144 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy7g2060 270 Gene3D WRKY domain 89 148 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g2060 Ahy-Chr7 78011555 78013606 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g2060 106 167 WRKY Transcription Factor Family AT1G66560 47.761 1.60e-15 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy7g2060 WRKY 8.70E-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g2060 - - ahf:112701659 505.753