Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g2025 ATGGGCTACACTGTTGTTATTGTTGGGTTATGGACATGGTGTTGTGATCTTTACATGTCCTTTGCTATGGCACAACACGTGTTTAATAGATTTTCATTGGTGGCTTCGGTGGAACCCCCACTCATTAATGTTAAAAACATTAGTTATCTAAAATTCTCTGCAGTTACTCAACTGCTGGACTCATATTTTCTTCTTGTGCTTCTTCGAGGCCCAAATCCAATCCACCAAATGGATCAGAAATTTGATTCTGTGAAAGACCTTTCTCTCATTTCAGAGAAGAACTGGTGCATTAAAGTAAGAATTTTGAGGATGTGGAAGGTTCCCTCATATGAAAAGAGATACTCGCAACCTTCAGTGGAGTTGGTTGTCATTGACAAAGATGGAACTCAGATCCATTGTTTCATCCGGTCTGTCCATTACCGGCTTTTTGAACCTATCCTTGAGGAGGGAAAGGTGTTTGTTGTGGGCAACTTCGCAATGGACTCAAACACACAGAAATACAGACCCACCAAGCTTAGCATGCGGATCATATTTAAGAGGGACACATTGGTGTCTGGTGCTGATGACATGGATATTCCAATTGAGTCATTTGATTTCGTGGCAACCAAGGAAATCTTATCATCCGTTAAGGATGACTTATATCTTATTGATTTTGTTGGTCTATTGTCCGCAAAGAGTGAGTTGATTCCTTTTGAATATAGGAATCGGAAGTCACATTACATGAAAATCGAGCTTGATGATCTGAGTGGCAGTGAGAAGCTTTCATGCACCTTGTGGGAAAATTATGCCTCTGAATTGATAACTCTTCTTGATGCGAACAAGGCCACTGAATTTATAATTGTGCTCCAATTTGCCAAGATGAAGTTCTACAATGGTGTTATGACTATAACCAACACAAACTACACCACAAGGCTCACGGTTAATGCTAATCTTGAAGTGGTTAAGAAATTCTGTCAAAACAAGCACAGCACCAGCGTTGAAGTTATTGGCCGGGTTGTGAGGCATTCTCCATCTGAAGATTTTCTCAGCCTTACCCCTTATGCTACCATACATCAAATAAAGGAAACTCTTGAGAAATCAACCTTCGTCACATGTGGAACGGTAATCGACATTGACAGGGATCATGCATGGTGGTACAAGGCTTGCAGGCAATGCACACAAGGACTGGAGGCACTTACTGACCAATTTTATTGTGCAAAGTGCGATGTTTACTCTACAGTTTTTGCCCCCAGGTTCTGCATTCAGGTTCGTGTTGGTGATGAGTCAGATACCGCAACTTTTGTTCTATTTGAGAATTGTGCGTCAAAGTTCTTAGGTCTAACTGCCGCTGAGATCCGCACCAGACTGCTTGCTAGGGGATATGGAAGAGACCATTTCCCAGATGAGCTTAATACACTGATTGGGAGGACACTTCTGTTCAAGCTTACTGTTAGGCATGATAGCTTAAATAAATTTCAGCCATGCGTGATTACCGTTTCAAGGATATGTTCTGACCCAGACATTATCTCCTCACTTGCTTTAGAAAAGAACATTAAATTGGATGCACTGCAGAAATTGACCACGGCTGCGGTTGTTCGAAGCAGTGACTTGGTTGGGTCTGAGAGCATACTCGGCGTCCGTGGATCCACCACCACTCCGAGTCCCAATTCTGATGCAGTTTCTGGTCACGGGGCTGCCCACGTGGTTACACATACTCCTGTTAAGCGGGTTTGCATTAGATCCGGCGGCGACTTCTCATCCCGTGCCACACCCTCTGCCTCCAAGAGTCTCCTCCCTGCCTTTGAGAGCTGCGTCCTAGGGAATGTCACCAACCCTGATGCAGGGGACATATGA 1833 0.4375 MGYTVVIVGLWTWCCDLYMSFAMAQHVFNRFSLVASVEPPLINVKNISYLKFSAVTQLLDSYFLLVLLRGPNPIHQMDQKFDSVKDLSLISEKNWCIKVRILRMWKVPSYEKRYSQPSVELVVIDKDGTQIHCFIRSVHYRLFEPILEEGKVFVVGNFAMDSNTQKYRPTKLSMRIIFKRDTLVSGADDMDIPIESFDFVATKEILSSVKDDLYLIDFVGLLSAKSELIPFEYRNRKSHYMKIELDDLSGSEKLSCTLWENYASELITLLDANKATEFIIVLQFAKMKFYNGVMTITNTNYTTRLTVNANLEVVKKFCQNKHSTSVEVIGRVVRHSPSEDFLSLTPYATIHQIKETLEKSTFVTCGTVIDIDRDHAWWYKACRQCTQGLEALTDQFYCAKCDVYSTVFAPRFCIQVRVGDESDTATFVLFENCASKFLGLTAAEIRTRLLARGYGRDHFPDELNTLIGRTLLFKLTVRHDSLNKFQPCVITVSRICSDPDIISSLALEKNIKLDALQKLTTAAVVRSSDLVGSESILGVRGSTTTPSPNSDAVSGHGAAHVVTHTPVKRVCIRSGGDFSSRATPSASKSLLPAFESCVLGNVTNPDAGDI* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g2025 610 PANTHER REPLICATION FACTOR A 1, RFA1 96 440 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy7g2025 610 SUPERFAMILY Nucleic acid-binding proteins 197 319 IPR012340 -
Ahy7g2025 610 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 96 440 - -
Ahy7g2025 610 SUPERFAMILY Nucleic acid-binding proteins 345 496 IPR012340 -
Ahy7g2025 610 CDD RPA1_DBD_A_like 96 184 - -
Ahy7g2025 610 Gene3D - 79 186 IPR012340 -
Ahy7g2025 610 Gene3D - 342 504 IPR012340 -
Ahy7g2025 610 CDD RPA1_DBD_C 350 483 IPR013955 -
Ahy7g2025 610 Pfam Replication factor-A C terminal domain 364 495 IPR013955 -
Ahy7g2025 610 Pfam Domain of unknown function DUF223 120 202 IPR003871 -
Ahy7g2025 610 CDD RPA1_DBD_B_like 217 317 - -
Ahy7g2025 610 Gene3D - 190 328 IPR012340 -
Ahy7g2025 610 SUPERFAMILY Nucleic acid-binding proteins 80 189 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g2025 Ahy-Chr7 76917991 76931326 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g2025 92 492 Core DNA Replication Machinery Family AT5G08020 22.170 1.82e-17 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g2025 - - adu:107458794 1023.85