Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g2009 ATGAAACAACTAGAAGTGCTAGACTTACATAGAAATGCATTCGATGGAACTTTGGATGCATGTGTTGCAAATTTGACGTCGCTTCGAGTTCTTGATCTCTTCGGAAACTCCTTAACCGGGAACGTTTTTGAACCTTGGATTTCTAGCCTTGCATTGTTGGAGACCCTTTCCCTGGGTATGAATTCATTTGAGGGCATATTCTCATTAAACATGTTGGCTAACCATTCAAAGCTTAAGGTGTTAGAACTCGACGAAATGGATTCTGAAACGTTTCAAGTGCAAACCGAAACCTCCCCTTGGATTGCATCATTTCAATTGGAACAATTAGACATCTCCAGTTGCAAAGTCAACTCACATACAAAAACACTTCCTTCTTTCCTTTCATCTCAGACCAGTTTGGAAATTATTGCCCTATTAGATAACGATCTAGTTGGTTCATTTCCCATCTGGTTGCTTCTAAACAACACAAAATTGGAAGGAGTATACTTTGGCGGCAATTGTTTTACAGGATCTTTTGAACTACCCTTTGATCTAAATTATCATCACATGGATCAACTAGAGTTCTTGGACATATCAGACAACAAAATCCAAGGTGAGCTCCCCAGGAACATAGGAGTTGTCTTCCCAAATTTAATTCTTCTGGATGTGTCTAACAATAAGTTTGGCGGTCATATTCCCGAATCAATTGGAGAGATGGAAAATTTGACAACATTGTATCTTGGAAATAACAGATTCTCTGGAAACTTACATGAGCACATTCTCAATGGATGCCTGTCATTGTCCAGTTTGATTATGGATAATAACCAGCTAAATGGAACACTTCCCAGTTTTACTGGAAATCCAAAGCTTGTCTTGTTATTTGCATCAAGGAACAATTTTCAGGGTTCTATAACGAGAGAGTTTTGCAGGTTGTTCATAAACTTGCAAGGAAATAGCATCACTGGTAAAATACCCGAGGCATCGACGAACATGTCAGTGTTGATGGATTTGAGTGACAATAAATTTACAGGAAGTATTCCAGAAAGTATATACAATCTCCCGAATTTGAGGTATTTATTATTGGCAGGTAATGACCTACAAGGCCAACTTTCCAGTCAAATATGTCAGTTAAAAAATCTCCAGGCCTTAGACCTTTCACGCAACAACTTATCTGGCTTTATTCCTTCTTGCTTGAACAAGATACGATTTTCAGAAGAAATTTATGATCCACCGAGTAGAATACCTGGATTCTCTTCAAGAGGTGTAGACATCATCGAGAAAACTTTGATGCTTGCTTTGATGCTTTTGTTTATGGAACAGAAAGTGCAATTCACAATAAAAGCTTCTTCTCGTGAATATGAAGGTGATATACTTGAAGACATATCAGTATTAGATTTGTCATCTAACCAATTGACAGGAAAAATTCCTTATCAGATAGGAGATTTACATGACCTTTTTGCACTTAACCTGTCCAACAATAATCTGAGTGGATCAATTCCAAAGAGCTTCAAGAAATTGCAAAGTATAGAGAGCTTGGATCTTTCAAATAACAAATTGAGCGGACAGATCCCACTTGAGTTACAAGACTTGCACTCATTAGCTATCTTCAATGTGTCTTACAACAACTTATCAGGTAGAGCACCTGATCAAGGACAATTTGGCACCTTTGGTGATAGCAACTACAAAGGAAACCCATATCTCTCTTGGGGTATTAGCAATAGAAGAATTGCAGCATCGCCACTATCTCCCATTCAATTGGATGAGGTAAACCACCATGATTCTGCAGTGGATTCCACTTCCTTCTATTGGAGTTTTGTTGCCACCTTTGTCACGGTGCTCTTGGCAATGCTGACGATCCTTTGGATCAATCCTCATTGGCGCGGAGCATGGTTTTATTTTATTGAAGGAGTTCTTCTCAAATGTTTTGGTGGACTTCTTGGAGATGCATTCTACTAG 1935 0.3866 MKQLEVLDLHRNAFDGTLDACVANLTSLRVLDLFGNSLTGNVFEPWISSLALLETLSLGMNSFEGIFSLNMLANHSKLKVLELDEMDSETFQVQTETSPWIASFQLEQLDISSCKVNSHTKTLPSFLSSQTSLEIIALLDNDLVGSFPIWLLLNNTKLEGVYFGGNCFTGSFELPFDLNYHHMDQLEFLDISDNKIQGELPRNIGVVFPNLILLDVSNNKFGGHIPESIGEMENLTTLYLGNNRFSGNLHEHILNGCLSLSSLIMDNNQLNGTLPSFTGNPKLVLLFASRNNFQGSITREFCRLFINLQGNSITGKIPEASTNMSVLMDLSDNKFTGSIPESIYNLPNLRYLLLAGNDLQGQLSSQICQLKNLQALDLSRNNLSGFIPSCLNKIRFSEEIYDPPSRIPGFSSRGVDIIEKTLMLALMLLFMEQKVQFTIKASSREYEGDILEDISVLDLSSNQLTGKIPYQIGDLHDLFALNLSNNNLSGSIPKSFKKLQSIESLDLSNNKLSGQIPLELQDLHSLAIFNVSYNNLSGRAPDQGQFGTFGDSNYKGNPYLSWGISNRRIAASPLSPIQLDEVNHHDSAVDSTSFYWSFVATFVTVLLAMLTILWINPHWRGAWFYFIEGVLLKCFGGLLGDAFY* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g2009 644 Pfam Leucine rich repeat 481 536 IPR001611 GO:0005515
Ahy7g2009 644 Gene3D Ribonuclease Inhibitor 425 568 IPR032675 -
Ahy7g2009 644 PRINTS Leucine-rich repeat signature 499 512 - -
Ahy7g2009 644 PRINTS Leucine-rich repeat signature 373 386 - -
Ahy7g2009 644 PANTHER RECEPTOR-LIKE PROTEIN 14 1 626 - -
Ahy7g2009 644 Gene3D Ribonuclease Inhibitor 1 325 IPR032675 -
Ahy7g2009 644 SUPERFAMILY RNI-like 7 540 - -
Ahy7g2009 644 Gene3D Ribonuclease Inhibitor 326 400 IPR032675 -
Ahy7g2009 644 Pfam Leucine Rich Repeat 372 392 IPR001611 GO:0005515
Ahy7g2009 644 SMART LRR_typ_2 475 498 IPR003591 -
Ahy7g2009 644 SMART LRR_typ_2 1 24 IPR003591 -
Ahy7g2009 644 SMART LRR_typ_2 370 393 IPR003591 -
Ahy7g2009 644 SMART LRR_typ_2 499 522 IPR003591 -
Ahy7g2009 644 SMART LRR_typ_2 232 256 IPR003591 -
Ahy7g2009 644 SMART LRR_typ_2 183 207 IPR003591 -
Ahy7g2009 644 SMART LRR_typ_2 25 45 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g2009 Ahy-Chr7 76561068 76563276 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g2009 1 628 Miscellaneous Gene Families AT3G53240 33.706 2.62e-109 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g2009 - - ahf:112703543 1278.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1722 18 52575293 52577125 Ahy7g2009 7 76561068 76563276 hybridization
Ahy18g1588 18 36118090 36124508 Ahy7g2009 7 76561068 76563276 hybridization