Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1997 CATTACTATGCACCAAACAGTAACAATAATTCTTCCTTTTCAGTACCAACACAGATAGTGCCTCATGCCTATGACTCAGCCTTTGCCTCTCTTCAATTCCAATATCCATGGCCTTTAGCCTTTGAAGGGTTTCCAGAAGATAGAGCTGCAAGTGCTTCTAAGAGCCATAGCCAAGCAGAGAAAAGAAGAAGGGACAGGATCAATGCACAGCTTGCAACTCTTAGAAAACTGATTCCTAAGTCTGATAAGATGGACAAGGCTGCATTACTAGGGAATGTAGTATATCATGTGAAGGATCTAAAGCGAAAAGCGATGGATGTGAGCAAAAGCATCATAGTTCCAAGTGAAATTGATGAAGTAACAATAATAGAGTGTGACCCTGATCAAGATGAAAGCTATGCTAAAGTGAAGATACTGAAGCACAACATTGTAATTTCAGTTTGTTGTGATGATAGACCTGAACTTTTCAGTGAACTCATTCAAGTCCTAAAAGGGTTGAGGCTCATAAATCAAGATCATAACATATTCAGAAGCAGCAAACAGCTAACAGAAGTAGCAAAACAGAAGCAGCAAAACATACTCAAAATAAAAAACATCAGAAAATCAGAATCCAAAATCAAGAAGGCAGCATAG 633 0.3855 HYYAPNSNNNSSFSVPTQIVPHAYDSAFASLQFQYPWPLAFEGFPEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGNVVYHVKDLKRKAMDVSKSIIVPSEIDEVTIIECDPDQDESYAKVKILKHNIVISVCCDDRPELFSELIQVLKGLRLINQDHNIFRSSKQLTEVAKQKQQNILKIKNIRKSESKIKKAA* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1997 210 PANTHER TRANSCRIPTION FACTOR BHLH30 11 169 IPR045847 GO:0003700|GO:0006355
Ahy7g1997 210 Pfam Helix-loop-helix DNA-binding domain 54 100 IPR011598 GO:0046983
Ahy7g1997 210 CDD ACT_UUR-ACR-like 144 178 - -
Ahy7g1997 210 SMART finulus 57 106 IPR011598 GO:0046983
Ahy7g1997 210 PANTHER TRANSCRIPTION FACTOR BHLH51 11 169 - -
Ahy7g1997 210 Gene3D - 46 109 IPR036638 GO:0046983
Ahy7g1997 210 CDD bHLH_AtAIG1_like 46 123 - -
Ahy7g1997 210 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 51 100 IPR011598 GO:0046983
Ahy7g1997 210 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 52 104 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1997 Ahy-Chr7 76127533 76128633 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1997 7 168 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 39.535 4.05e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy7g1997 HLH 1.10E-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1997 - - ahf:112701622 392.504