Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1961 ATGTTATCATCTATAAAAAAATCTTCAATTTTCAGCATCATTTTTTGTATCAACAAAATGAGGAAGTTCCTGGTTATAGCCTTATCTACAACAATATGCTTCATCGCTTTCGTGATATCCAAGATCTTGATCTCTGTTCTTCTCTACAAAAGATGGAAAAGAAAGCACATAATTTATGAAAATGAAGGAAAGATGGTAATCTTTAGATCTTCATTGCTGCAATCTCTTAAATCCGATGCAGTCTTACAGAAGACACGAAAACTGAGCAATAAAGACATCATTGGATCTGGTGGCTATGGAGTGGTTTATGAACTAAGACTAAATGAATCTGTAGCCTTCGCCGTGAAGAGGCTGAACCGGGGATCAGAAGAGAGGGACAATGGTTTTGAGAGAGAGTTGGAGGCGATGGCGGACATAAAGCATCGGAATATTGTAACTCTTCATGGATATTACATTGCACCACATTACAATCTTCTTATATTTGAGCTAATGCCAAATGGAAGTTTGGATTCCATTTTGCATGGGAGATCAAAGGAGAAGAAGCATTTGGATTGGCCAACAAGATATAGAGTAGCTGTAGGTGCTGCTAGAGGAATATCATATCTTCACCATGATTGCATCCCTCACATTATCCATAGAGATATCAAATCAAGCAACATATTGCTGGATCAAAACATGGGGGCGCGAGTTTCTGACTTCGGATTAGCCACGTTGATGGAGCCGAATAAGACTCATGTTTCGACAATGGTGGCAGGAACCTTTGGATACTTGGCACCTGAATATTTCGATACTGGAAGAGCAACTGTTAAAGGTGATGTTTACAGCTTTGGAGTGGTATTACTAGAGCTCTTAACTGGGAAGAAACCCAGTGATGAAGCATTTGTAGAAGAAGGAACCAAGCTTGTCACATGGGTGAAAGCTGTTGTTCAGGAGAAGAAAGAAGAATTAGTTCTTGACAGTAGCTTAGGGTCCTGTCCAATGCAAGAGGTAAACAAGGTGTTCAACATTGCAATGAAGTGTCTTGAACCAGACCCTTTGAATAGACCAAACATGGCTGAGGTTGTCAACTTGCTTGAACAAGCAGTATCATGCAAACATGTTACTACAACATTGCCATGTACAATTAATGACATGTCACCCTAA 1143 0.3972 MLSSIKKSSIFSIIFCINKMRKFLVIALSTTICFIAFVISKILISVLLYKRWKRKHIIYENEGKMVIFRSSLLQSLKSDAVLQKTRKLSNKDIIGSGGYGVVYELRLNESVAFAVKRLNRGSEERDNGFERELEAMADIKHRNIVTLHGYYIAPHYNLLIFELMPNGSLDSILHGRSKEKKHLDWPTRYRVAVGAARGISYLHHDCIPHIIHRDIKSSNILLDQNMGARVSDFGLATLMEPNKTHVSTMVAGTFGYLAPEYFDTGRATVKGDVYSFGVVLLELLTGKKPSDEAFVEEGTKLVTWVKAVVQEKKEELVLDSSLGSCPMQEVNKVFNIAMKCLEPDPLNRPNMAEVVNLLEQAVSCKHVTTTLPCTINDMSP* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1961 380 SMART serkin_6 88 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy7g1961 380 Pfam Protein tyrosine and serine/threonine kinase 90 358 IPR001245 GO:0004672|GO:0006468
Ahy7g1961 380 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 21 363 - -
Ahy7g1961 380 PANTHER BNAA07G39120D PROTEIN 21 363 - -
Ahy7g1961 380 ProSiteProfiles Protein kinase domain profile. 88 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy7g1961 380 ProSitePatterns Protein kinases ATP-binding region signature. 94 116 IPR017441 GO:0005524
Ahy7g1961 380 Gene3D Transferase(Phosphotransferase) domain 1 164 371 - -
Ahy7g1961 380 SUPERFAMILY Protein kinase-like (PK-like) 73 359 IPR011009 -
Ahy7g1961 380 Gene3D Phosphorylase Kinase; domain 1 50 163 - -
Ahy7g1961 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1961 Ahy-Chr7 75028592 75031756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1961 22 362 Receptor kinase-like Gene Family AT2G35620 44.509 3.09e-97 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Ahy7g1961 PK_Tyr_Ser-Thr 2.20E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1961 - - ahf:112703495 744.577