Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1880 ATGGCTTCTCCGGCAAACCCTCCAACTCAAAGCATGGTATCAACCGAAACCATTCAGAAAGCAATCGACGCACTCTTCAAATGGCGCAAATCCAATTCCACCGCCAAACCCCAAAAACTCTTCGACAACGACGAGGAATTTATCTACCTCGTACTCACCCTCAAGAAGATACCCCAAAAGGATCACACTAACGTAACCCCACGCAAGATTCCTCTACCCTATACCCTCATCTCCCCTTCCTCTGAAACCTGCCTCATCGTCGACGACAGGCCCAAATCGGGCCTCACCAAGGCCCAAGCCCAATCTAAGATCCAGGCTGAGAAGGTCGCCGTTTCGAAGGTCCTCAAGCTCTCGAAGCTCGCCTCCGATTACAAGCCATTTGAGGCAAAGCGGAAGCTATGCGACTCATACGACTTGTTCTTCGCGGATAGGAGGGTGGTTCCTCTTCTTCCGAGGCTGTTGGGGAAGCAATTCTTGAAGAAGAAGAAGGTTCCGGTGCCCTTGGATTTGAAGAAGGGGAATTGGAAGGAGCAGGTTGATAAGGCGTATTCCTCGGCGTTGTTTTCTGTTGGGAATGGGACTTGTTGCGTTGTCAGGGTCGCTAAGGTGGCGATGGCGAGGGAGGAGGTCGTGGCGAATGTGACCGCGGCAATTGAGGGGATTGTGGATGCTGTGCCGAGGAAGTGGAAGAATGTGAGGTCGTTTCATGTGAAGCTGTTGGAGTCGCTGGCACTGCCGGTTTATCAGGCTGTTCCGGATGTGAGGTTGAGGATTGAGGGAGGAGACAGTGAAGGAGAGGCTATGGAGAAGGAGGAATTGAAGAAGAAGAAAAAGAAGAAAAAGGGGAGGTATATGGATAGTGACCTTGGCGAGGATCATAGCAAAGATGAGTTAGGTAGTGATGATTTTGAGCATGCGGATAATGATAACGGTCGTGACTTGGTGAGTTTGAAGATGAAGAAAGGAGATCAAGTGAAAAATGGGGCTTTGAGTGGGTTGAGTAATGTCAAGCGAGAGACGAAGAAACGCGGGTTAGTTCAGTGGAATGGAGCAGATATGGCAAAGAAAGTAAAGCATTAA 1080 0.4972 MASPANPPTQSMVSTETIQKAIDALFKWRKSNSTAKPQKLFDNDEEFIYLVLTLKKIPQKDHTNVTPRKIPLPYTLISPSSETCLIVDDRPKSGLTKAQAQSKIQAEKVAVSKVLKLSKLASDYKPFEAKRKLCDSYDLFFADRRVVPLLPRLLGKQFLKKKKVPVPLDLKKGNWKEQVDKAYSSALFSVGNGTCCVVRVAKVAMAREEVVANVTAAIEGIVDAVPRKWKNVRSFHVKLLESLALPVYQAVPDVRLRIEGGDSEGEAMEKEELKKKKKKKKGRYMDSDLGEDHSKDELGSDDFEHADNDNGRDLVSLKMKKGDQVKNGALSGLSNVKRETKKRGLVQWNGADMAKKVKH* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1880 359 Gene3D - 50 239 - -
Ahy7g1880 359 Pfam Ribosomal protein L1p/L10e family 36 242 IPR028364 -
Ahy7g1880 359 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 7 286 - -
Ahy7g1880 359 MobiDBLite consensus disorder prediction 283 320 - -
Ahy7g1880 359 PANTHER RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1 7 286 - -
Ahy7g1880 359 MobiDBLite consensus disorder prediction 265 320 - -
Ahy7g1880 359 CDD Ribosomal_L1 18 247 IPR028364 -
Ahy7g1880 359 Gene3D - 84 186 IPR016095 -
Ahy7g1880 359 SUPERFAMILY Ribosomal protein L1 12 248 IPR023674 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1880 Ahy-Chr7 71983704 71985252 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1880 43 238 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 26.396 5.31e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1880 K14775 - ahf:112697689 348.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1761 18 58443822 58445243 Ahy7g1880 7 71983704 71985252 hybridization