Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1857 ATGGCACTGAGTACGTACTTGAATGGAGATGCACTTCAAAATTCATTAATATCAGAAAATTTTACCACCAATTTTCATGAACTAACTACACCAGAAGAACTTACACCTGACCATTATTACCACCAACACAACCAGGAAGGCTTGTTTCCTAACAACTTTTTCTTTGACCCTTATTTTGACCTTAATAATGAATTTTTGTCTTCTCATCAACATGGTCCTGATTGCACTTCTTCTCATAACTCCTTTATCTCACCCAATGATCTATTTCAGACTGAATATTCTAATGTTAACACCCTTCTTTCATGTCCCAAACGCCAAAAGTACTTTCATGAGGATGAAGAACTCCAACTCCCTCCTCCACTCAAGGAGTTTGCATCGCCCAGTCTATTTGATGGGTTTATACTGAATTCATCTTCCTTACCATCAGAAGAAGCAGCATTAGCAGAAGAATTACTATTACCTGCAGCAGTAGCAGTACCTTCATCAGACTTCATGGTTCCTGAAGTTGTACGCAATGGTTTTTGTGTGGGAATTAATAATGAGAGTGAGAAGAAGGACAGCGAGAGAACTATTTCTGCACAGAGCATAGCCGCAAGGGAGAGAAGAAGGAAGATCACAGAGAAGACACAAGAGCTTGGAAAGTTGGTTCCTGGTGGACCAAAGATGAACACAGCTGAGATGCTCCATGCAGCTTCTAGATACGTGAAGTACCTTCAAACTCAAGTTGGTATGCTCCAACTAATGAACACAATTCAGAAAGAAGATGAGGTTGCTCCTCCAAGTGAAGATCTATGTGCTCTTGTTACTTCTCCCTTTGTTCAAGAGAAGCTTTATTCTGAGGAACTATGCTTTGTCCCTAAAGACTTTGTTACAACTTTGACAAATCAGCGTGATGTTCGATCAAAGCCTACCATCCTTAAGGATCTTAAAGAGTTGATTGAAACAAACAATTTGCAGAAGAAAGCATAG 969 0.3973 MALSTYLNGDALQNSLISENFTTNFHELTTPEELTPDHYYHQHNQEGLFPNNFFFDPYFDLNNEFLSSHQHGPDCTSSHNSFISPNDLFQTEYSNVNTLLSCPKRQKYFHEDEELQLPPPLKEFASPSLFDGFILNSSSLPSEEAALAEELLLPAAVAVPSSDFMVPEVVRNGFCVGINNESEKKDSERTISAQSIAARERRRKITEKTQELGKLVPGGPKMNTAEMLHAASRYVKYLQTQVGMLQLMNTIQKEDEVAPPSEDLCALVTSPFVQEKLYSEELCFVPKDFVTTLTNQRDVRSKPTILKDLKELIETNNLQKKA* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1857 322 Pfam Helix-loop-helix DNA-binding domain 195 239 IPR011598 GO:0046983
Ahy7g1857 322 SMART finulus 195 244 IPR011598 GO:0046983
Ahy7g1857 322 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 189 238 IPR011598 GO:0046983
Ahy7g1857 322 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 1 310 - -
Ahy7g1857 322 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 187 250 IPR036638 GO:0046983
Ahy7g1857 322 Gene3D - 187 258 IPR036638 GO:0046983
Ahy7g1857 322 PANTHER TRANSCRIPTION FACTOR BHLH52-RELATED 1 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1857 Ahy-Chr7 71350564 71352568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1857 162 316 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 44.516 6.12e-32 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy7g1857 HLH 2.00E-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1857 - - aip:107610272 517.309